Silurus meridionalis (southern catfish): 124389087
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Entry
124389087 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 42-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124389087
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124389087
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124389087
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124389087
Ubiquitin system [BR:
smeo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124389087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
124389087
NCBI-ProteinID:
XP_046710271
LinkDB
All DBs
Position
7:complement(10613555..10618889)
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AA seq
849 aa
AA seq
DB search
MATCVASRCDVASYGGNKAFPAKKPITQVALNSADGINLPQKILFQSERLSMKWTQVHHI
GAGLQNLGNTCFLNSALQCLSYTAPFANYMLSGEHSKTCHESEFCMXCTMQNHITLVFAN
SGNVIKPIGVLHELKRIAEHFRYGNQEDAHEFLRYTVDAMQKSCLSTDKYIHGTNLIQQI
FGGHLRSRVKCRNCKAVSDTFDPYMDIALDIENAPSINKALEQFVKPEQLDWENAYRCSS
CKEMVKASKRLTIDRNSNVLTISLKRFDFSGVKISKDVRYNEYIDLRPYMSKSRGEPQIY
GLYAVLVHSGFSCYEGHYYCYVKASNGQWYEMNDSSVTPTDIRSVLDQQAYLLFYIKQRT
THLKNGDFIHKGFTPGHSSPRPVVKQKLNGHSCTSSPIIGPQLPHMLKNNSYVNGNGSSK
DHNNGLEPSSSGISEGNTSKLSSYSFTTSSSNSDHPVQPRVKMSFIVANGEVTQCNPTLS
SASTSSSHSSPFTAGHQHFHPSSSTSKCQRSKQVNGTSSYCTATFLVPYDEKSSHESGLE
SKFSDSSTFKPHGVAKTAIENGGMHSPLSHNSSSPSPCRNPTDSQRSNSLSESYTGANGS
GHRHVNGHHKVKGFKHSDKTSDSPASASSITDSDSQRVSNCPRSEGLLSQSINTERAKPL
TNPLVQRVSNPAPTLGTDLQALSKPAEVMPKTQVTLTDSSSKEKATKESAVSNHNLTQQK
NDKPPSQRSPKMANICKQTNGKDNMKMCQSGKIQEHYRYLTPTEDKDGDKKNSRNCKERY
GDSHQSEKEYYPPRKRVRDSSRDKEAAQYRDKYADHHRDYHYKRGREKYSWAPEWDRRYQ
TSHRSSRHI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctacctgtgtggcttccaggtgtgatgttgcttcttatggaggcaacaaagcattt
cctgctaaaaagccaattacacaagtggccttaaacagtgccgatggcatcaatctgcca
cagaagatcctgttccaatcagagcgtctcagcatgaaatggacccaagtgcaccatatt
ggagcaggtcttcaaaacctgggcaacacatgttttctgaattcagctcttcagtgtctt
tcttacactgcaccctttgccaactacatgttgtcaggagagcattccaaaacatgtcat
gaatctgagttttgcatgnnctgtacgatgcaaaatcacattaccctggtgtttgctaat
tctgggaatgtcattaaacccattggcgtgctgcatgaactaaaacggattgcagagcat
ttccggtatggaaatcaagaagatgcccatgagttcttgcggtacacagtggatgcaatg
caaaagtcctgcctgtctactgataagtatatacatggcactaatctgatccagcagata
tttggaggacatctgaggtctagagtaaagtgtcggaactgtaaagccgtatcagataca
tttgatccttatatggatattgcactggacattgagaatgcaccatctattaataaggct
cttgagcagtttgtgaagcctgagcagttggattgggagaatgcatacaggtgcagcagt
tgtaaggaaatggttaaagcgtccaaaagattaaccatcgaccgcaactccaatgtgctc
accatctctctgaaacgctttgacttcagtggagtcaaaatctccaaggacgtgagatac
aatgagtatattgacttgcggccctacatgtctaagtctcgtggagagccgcagatttac
gggctgtatgctgtactggttcactcaggcttcagctgctatgaaggacactactactgc
tatgtaaaggcaagtaatggccagtggtatgagatgaacgattcatcggtgactcccact
gatattcgttctgtgctggaccaacaagcatacctgctgttctacatcaagcaaaggaca
acacatctgaaaaatggagattttattcacaagggttttactccaggccactcatctccc
cggccagttgtaaaacagaagctaaatgggcattcttgtacctcctcacctataattggc
ccacagctccctcacatgctaaagaataattcatatgtgaatggcaacggctcctcgaag
gaccataacaatggcttagagccgagcagcagtggcattagtgaagggaacacctccaaa
ttgtcctcctattccttcacaacttcatcctccaattctgatcatcccgtccaacccagg
gtcaaaatgagctttattgttgccaatggagaggtgacacagtgcaacccgaccttatcg
tctgcatcaacttccagcagtcattcgtctccattcacagctggtcatcagcattttcac
ccttcatcctctacctcaaaatgccagcgctccaagcaggtcaatggcacatcctcatac
tgcactgctactttcctggttccttatgatgagaaatcatctcatgagtctggcctggag
agcaaattctcggacagcagcacgtttaagcctcatggtgttgccaagacagccattgag
aacggtggcatgcacagccctctttctcataattcaagctcaccttcaccctgcagaaat
ccaacagactctcagagatccaacagcctctcagagtcttacacaggtgcaaatggttca
ggacacaggcatgtgaatggccatcacaaagtcaaaggcttcaaacattctgacaagact
tcagacagtcctgcctctgcttcttccataactgactctgattcgcagcgtgtgtcaaac
tgtcccagatcagagggccttctttcccaatcaatcaatacggaaagggctaaaccactc
accaaccctcttgttcagcgtgtctcgaacccagcacccacactgggcacagacctccag
gcattgtctaagccagcagaggtgatgcctaaaacacaggtgaccttaacagattcgtca
agtaaagagaaggccacaaaagagtcagctgtgagcaatcacaatcttacccagcagaag
aatgataaacctccatcacagagaagtcccaagatggcaaatatctgtaaacaaacaaat
ggcaaagacaacatgaaaatgtgtcagtctggcaaaatccaagagcattaccgatatttg
actcctactgaggacaaggatggagacaaaaagaacagtcgaaactgcaaagagcgttat
ggagacagccatcagtcagaaaaagagtattacccacctaggaaacgtgtccgcgattcc
tccagagataaagaggcagctcagtaccgggacaaatacgcggaccatcacagagactac
cactacaaaagagggagagagaagtattcgtgggctccggaatgggacaggagataccag
acctcgcaccgctcttcaagacatatataa
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