Silurus meridionalis (southern catfish): 124389113
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Entry
124389113 CDS
T08004
Symbol
arhgef15b
Name
(RefSeq) rho guanine nucleotide exchange factor 15 isoform X1
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389113 (arhgef15b)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124389113 (arhgef15b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
124389113
NCBI-ProteinID:
XP_046710315
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All DBs
Position
7:complement(24861896..24894744)
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AA seq
917 aa
AA seq
DB search
MSTLGAAAAARPPPKPQIPSKPGMNSSHTPVTDKDTPNKNSGKVHEIVSKFNHQPPSAAG
PAAKSGRQKKPKRAPTVKPKPKVTSPGQVLGNVAPPLPIKQRQSQRKEAERNSFSVSRDI
TDGQQAAPDGKEFEQQNARSRPDQEPRCEKNCSCVCHLQRPGMKLVWVQMSEEEEEELKR
TADDTVTEEESESDAEAGLDLYQSGSSESEYSLNDPQDGNKTRFKATLNIIECQLRRKSD
PGLHDLNPLPLNLMQLSKTHSTSEDESIYEATIDLIAPPQEKMDKTSTIPEILVNKSPPA
IPPRMPLEKHKDKCVPRRVPLSTLTGESQTPKLPSVDSGSRERLKPVRAPPSPPVRTCDR
STSNVSVTSKGDDEQSGSAGESENKEQKRPIALPRKKSLDMEAHMPDELLYQIYTETFIT
KEIRRQTVCRSISKTSADYRMDHSSGSGAEGVRSGTNSFQRTLWQDQPAVQESGILNTIT
PEECKYQESMYEVLTSEVSYLRSLRVLTDHFMESRELSDNLINRDKKTLFSNILRIREVS
EKFLKDLEDHLDESLLLTNICEIINYHAQHNFPAYIDYIRNQIYQEKTFTSLMQTNTGFA
TAIAHLQEAPVCQRLPFSSFLLLPFQRITRIKILIENILKRTAVGTKQEEMASKALAAVS
KIIDECNTQVGKMKQMEELIEINKTLEFDKLKAVPVISQNRFLEKRGELQEMAKSGTLFN
IKPKLTPVYLFLFNDLLILATKKSSERYVVIDHAHRSLVQVHAMGEQAMSVNLENCFCLT
LLENHQGRIMERLLKAPSESDVHRWLAAFPNPENPNREQDEVIYEDWDCPQVQCVKQYVA
TQADELNLDPLEIVNVIRKTNEGWYEGIRLSDGQKGWFPVNNVLEITSEHMRRRNLRERY
RVIQAASVMTNTTRTSS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctgggagcagcagcagcagctcgtcctcctccaaaaccccaaatcccctcc
aaacctggcatgaactcttcacatacacctgtgacggacaaggacacgcccaataaaaac
agtgggaaagtccatgagatagtcagcaagtttaaccaccagccaccttctgctgcaggt
cctgctgctaaatcaggacggcaaaagaaacccaaacgagctcctacagtcaaacccaag
cccaaagtcacgagtcctggtcaggtcctaggcaatgtggcaccacccctgcccattaaa
cagcgccaatcacagaggaaggaggcggagcggaactcgttctctgtctcacgtgacatt
accgatggtcaacaagcagctcctgatggtaaagagttcgagcagcagaacgcgaggtca
agaccggatcaggagcctcgatgtgagaagaactgcagttgcgtgtgtcacctgcagcgt
cccggcatgaagctagtatgggttcagatgtctgaggaagaagaagaggagctgaaacgg
accgcagacgacacggtcaccgaggaagagagcgagagcgatgcggaagcgggattggat
ctgtaccagagcggttcttcagaatcagaatacagcctgaacgatccccaggatgggaac
aagaccagattcaaggcgacgctgaatataatcgagtgccagctgaggaggaaatccgac
cctgggcttcacgacctcaaccctttgcctctgaatctcatgcagctctccaagactcac
tctacctctgaggatgagtctatatacgaagccaccattgacttgatcgctcctcctcaa
gagaaaatggacaaaacatctaccatccctgaaatcctggtgaacaaatctcctcctgcc
attccaccacggatgcctctggagaaacacaaggacaaatgtgttcctagaagggttcca
ctttctacactaactggagagtcccaaaccccgaagctgccttctgtggattccgggtcc
agagaacgtctgaaaccggttcgagctccgccttctcctccagtccgaacctgtgacaga
agcacgagcaacgtctctgtcacatctaaaggtgacgatgaacaaagcggttctgctgga
gagtctgaaaacaaagagcaaaaacgtcctattgccctccctcgaaagaagtcactggac
atggaggctcatatgcctgatgagcttctgtaccagatttacaccgaaaccttcataacg
aaggagatccgccggcagacggtgtgtcgcagcatcagtaagacgagcgccgattaccgg
atggatcacagctcgggttccggcgctgaaggtgtgaggagcggtacaaattcattccag
agaacgctgtggcaggaccagcctgcagtccaggaaagcggcattctgaacaccatcacg
ccggaggagtgcaagtaccaggagagcatgtacgaggttttgacatcagaagtgtcgtac
ttgcgttccctgcgcgtcctgaccgaccatttcatggagtcacgagaactcagtgataac
ctcattaaccgagacaaaaagactctcttctccaacatcctgcgcatccgagaagtcagc
gagaagttcctgaaggacttggaggaccatctggatgaaagtttactcctcacgaacatc
tgtgagatcatcaattaccacgcacagcacaacttccccgcgtacatagattatatccgc
aaccagatttaccaggagaagaccttcacctcacttatgcagactaacacgggctttgcg
acggcgatcgctcatctacaggaggcccccgtatgccagcgcctgcccttttcctccttt
ctgctgctgcccttccagcgaatcacacgcatcaagattctgattgagaacatcctgaag
agaaccgcagtgggcaccaaacaggaagaaatggcctcaaaggctctggctgctgtgtct
aagatcatagatgagtgtaacacccaggtggggaagatgaaacagatggaggagctcata
gagatcaacaagactctggagtttgataagctgaaggccgtacccgtgatctcgcagaac
cgattcctggagaagcgaggagagctgcaggaaatggccaaaagtggaactctgtttaat
ataaagcccaaactcacacccgtctacctcttcctcttcaacgatctgctcatcttagcc
accaagaaaagctcggagcgctacgtagtgattgaccacgcccaccgctctctggtgcag
gttcacgctatgggagagcaggcgatgagcgtgaacctggagaactgcttctgcctcacg
ctgctggagaaccatcagggacgcatcatggagaggctcctaaaagcaccgtctgagtct
gatgtgcacagatggctagcggcgtttcccaaccctgagaatccaaaccgggagcaggat
gaggtcatatatgaggactgggactgtccacaggtgcagtgtgtaaagcagtacgtagcc
acgcaagctgatgagttaaatctggatcccctagagatcgtcaacgtcatccgtaaaact
aacgaaggatggtacgaggggattcgtctgtctgatggacagaaaggctggttccccgtg
aacaacgtcttggaaatcaccagtgaacacatgaggagacgaaacctgcgagaacgttat
cgtgtcattcaggcggccagcgttatgaccaacactacacgcaccagctcgtga
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