Silurus meridionalis (southern catfish): 124389155
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Entry
124389155 CDS
T08004
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03040
Spliceosome
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124389155 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124389155 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124389155 (srsf2a)
Spliceosome [BR:
smeo03041
]
Common components
Common spliceosomal components
SR proteins
124389155 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_8
Motif
Other DBs
NCBI-GeneID:
124389155
NCBI-ProteinID:
XP_046710413
LinkDB
All DBs
Position
7:23394209..23397597
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AA seq
220 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGGPPRRYSGYGRRSRSR
SPRRRRHSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSRSKTRTPRRSKSKSPSRSRSRSK
TKSPSRSRSPHSNRASKSKSRSRSRSRPKSPEANGTTQES
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtagacctccgcctgacgtcgagggcatgacctcgctgaaagtggacaac
ctgacctaccgaacctcgcccgagactctgcggcgcgtcttcgagaagtacggccgcgtc
ggcgacgtctacatcccgcgcgaccgctacacgaaggagagccgcggcttcgccttcgtg
cggttccacgacaagcgcgacgccgaggacgcaatggacgccatggacggcgcgctgctc
gacggccgcgagctccgcgtgcagatggcgcgctacggacgcccgccggactcgcactac
ggccgtcgcgggggaccgccacgccgctacagcgggtacgggcgcaggagtcgcagtcgc
agcccacgacgcaggaggcacagccgttcccgcagcaggagtcgctctcgctccagaagc
agatcccgctacagccggtccagatccaggtcttactctcggtctcgctcccgctctaag
acccgcacaccccgcaggagcaaatccaaatctccctccaggtcccgatccagatctaag
accaagtctccttctaggagtcgcagcccccactcgaatagagcgtccaaatccaagtcg
aggtcccggtccaggagcagacccaaatctccagaggctaatggaaccacccaggagtcg
tga
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