Silurus meridionalis (southern catfish): 124389194
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Entry
124389194 CDS
T08004
Symbol
calcoco2
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
smeo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124389194 (calcoco2)
04137 Mitophagy - animal
124389194 (calcoco2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389194 (calcoco2)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124389194 (calcoco2)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Xenophagy
Cargo receptors
124389194 (calcoco2)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
124389194 (calcoco2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
Csm1_N
Myo5a
zf-C2H2_4
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
124389194
NCBI-ProteinID:
XP_046710464
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All DBs
Position
7:11771255..11775926
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AA seq
554 aa
AA seq
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MSESADDDGVQVDMESSTYSQVVFIDVPRSYPLNTHVTCCYKMTGDLIPSSKDWIGIYKV
GWDSVQKYYCYQWTTACLDYKGLEPLTQQIFFKESYLPKDDGEFYQFCYVDSSSKVRGAS
TPFCFQNPAETTVDCSLLVISTQEQVEQKEREMEALLTEMEHTREQNTILKNKLDEALRE
IYHLRMNNDKLKSNSTSETFSLKEQPESPELDTMEQPFLSDIVAETKPENESLNSMRGKY
DNAVLKINRLKQEKALLTQVNKQKDAEISELRPRAEKAEQDLNRIQDQCQLQQVDIQSVQ
KENERLNTENEGMKCDLERLQEEIKALKVTLSKQRPPEGDKNDPKILTLTNELAEVRGAL
RKEILNSNEANKRADKAELELKEMKMQLEKRTVAEESRRELEIAEAQKRYTEQANIAEAS
RLEKEKLSKENKKFKEDIARLQTMIFELSSRSNVSNAQQQQNPLSPTPASPNNTQQQPQS
DPYFFEDNRGPFGNPDNAGKKAKVCRHCQESFPDITEEELVTHEQSHKVCPFCTLICDDC
GQQEFEDHVYSHEE
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagagcgcagatgatgacggggtgcaggtggatatggagtcctctacgtattct
caggtggtctttattgacgttcctcgttcttatccactcaacactcatgtgacctgctgt
tacaagatgactggagacctgatccccagctctaaagactggataggaatatacaaggtt
ggctgggattcagtccagaaatattattgttatcaatggacaacggcttgtttggactat
aaaggacttgaaccccttacacagcaaattttctttaaggaatcctatctccctaaagat
gacggtgagttttatcagttctgctatgtggacagcagtagtaaggtgcgaggagcgagt
acacctttctgcttccaaaacccagcagaaacgaccgtagactgcagccttttagtgatc
tcaacacaggaacaagtggagcagaaggagagggaaatggaggccttactgactgagatg
gaacacacaagagaacagaacacaattttaaaaaataagctggatgaagcactgcgagaa
atctatcatctcaggatgaacaatgataagctgaagtctaatagtacaagtgaaacattt
tcactaaaagagcagcctgaaagtccggagctggataccatggagcagccttttctttcg
gatattgtggcagaaaccaaaccagaaaatgagtcactgaactccatgcgtgggaagtat
gacaacgcggttctgaagattaataggctgaagcaagagaaagccctactcactcaagtg
aacaagcagaaagatgcagagatttcagaactaaggcccagggctgaaaaagcagaacag
gaccttaacagaatacaagatcagtgccaacttcaacaggttgatatacagagtgttcag
aaagagaatgaaaggttgaatactgaaaatgagggaatgaaatgtgacctggagagactg
caggaagagatcaaggcattaaaagtgaccttgtcaaagcaaaggcctcctgagggagac
aaaaatgacccaaagattttgaccctgactaatgagcttgcagaagtccgaggggcactg
cgcaaagagattttgaacagtaatgaggcgaacaaacgtgcagataaagcggagttggag
ctgaaagaaatgaagatgcagcttgaaaaaaggactgtggctgaggaaagtcggagagag
ttggagatcgctgaagctcagaaaagatacactgaacaggcaaacatagcagaggcctca
cgattagaaaaagaaaagctgtcaaaggaaaacaagaaatttaaggaggacattgcaagg
ttacagacaatgatatttgagctgtcctcaaggtcaaatgtaagcaacgctcagcagcaa
caaaaccccctcagtccaacacctgcatctcccaacaacacccagcagcaaccacagtct
gacccatatttctttgaggacaatcgtggaccttttggaaatcccgataatgcaggaaaa
aaggcaaaggtgtgccgtcactgccaagaaagctttcctgatattaccgaagaagaactg
gtgacacatgagcagtctcataaggtgtgccctttctgcacactcatttgtgatgactgt
ggacagcaggagtttgaagaccatgtctacagccatgaggaatag
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