Silurus meridionalis (southern catfish): 124389227
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Entry
124389227 CDS
T08004
Symbol
chmp6b
Name
(RefSeq) charged multivesicular body protein 6
KO
K12195
charged multivesicular body protein 6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
smeo04144
Endocytosis
smeo04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124389227 (chmp6b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124389227 (chmp6b)
09143 Cell growth and death
04217 Necroptosis
124389227 (chmp6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389227 (chmp6b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124389227 (chmp6b)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
124389227 (chmp6b)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124389227 (chmp6b)
Exosomal proteins of other body fluids (saliva and urine)
124389227 (chmp6b)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
124389227
NCBI-ProteinID:
XP_046710517
LinkDB
All DBs
Position
7:complement(18884016..18891873)
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AA seq
204 aa
AA seq
DB search
MGNIFGKKKRSRVTEHDRAVLQLKQQRDKLKQYQKRITLQLEKERQLAKQLLKDGKKEKA
ILLLKKKRFQEQLLDKTENQISNLERMVQDIEFAQIEIKVIEGLKVGNDCLKKMHEVMSI
EEVERIMDETQESIEYQRQIDDILAGSLTQEDEDAVLAELEAITQGDIELPEVPDEQLPE
IPDQEPEPEKERVKKKSERELLSL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatatttttggcaaaaagaaacgaagccgagtcacagaacacgaccgagctgtt
ctgcaactaaagcagcagagagataaactgaagcaatatcagaagaggatcactctgcag
ctggagaaggagagacagcttgccaagcagctgctgaaagatggcaagaaagagaaagcc
atccttttgcttaagaagaaacgctttcaggagcaacttctggacaagactgagaaccag
ataagcaacctggaacgaatggttcaagacattgagtttgcacagatagaaataaaggtg
attgaaggactgaaggtcggcaacgactgtttaaagaaaatgcatgaggtgatgtccata
gaagaagtggagagaatcatggacgagacccaggaatccattgagtaccagaggcaaatc
gatgacattctggcaggctctctgacacaagaggacgaggacgctgtattagcagagctt
gaagctatcactcagggagatattgagcttcctgaggtgccagatgagcaattgccagaa
ataccagatcaagagcctgagccggagaaggaacgggtgaagaagaagtcggagagagaa
ctgttgtctttgtaa
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