Silurus meridionalis (southern catfish): 124389263
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Entry
124389263 CDS
T08004
Symbol
si:ch211-176g6.2
Name
(RefSeq) ras-associating and dilute domain-containing protein isoform X1
KO
K26418
Ras-associating and dilute domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124389263 (si:ch211-176g6.2)
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Gene cluster
GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_6
PDZ_2
FHA
Motif
Other DBs
NCBI-GeneID:
124389263
NCBI-ProteinID:
XP_046710565
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Position
7:complement(6360385..6392394)
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AA seq
1165 aa
AA seq
DB search
MTMTWTERTLRRTGTAPPSPAAAPISAAKRSLSKLSRKHSNGSVQSRASVGTAISAEGVG
FRQPAKSRIRRHQHRLSSVFTRGVLSARGDTTTTGEEPSVTDDPSELSSHITAPGILKVF
GTEICEGANYKSVLATTHSSAKELVKEALERYSLNKADADAYVLCDVIGCIREREWRSEC
VRVVGDNERPLLLQSLWKPKEGYARRFEIQSRVSAEEKISRDKDTVTAGINAQARKLQKT
RSRGRSVVFGGSGHGILTDIGLSLCRSLSEADLRSSPEPQQSLKSQSGGEDPKAYKELPC
ESGRKEELGSSDDNCTQYSIHPPVHFPYFLLLQGYSYRQDFIIYSLNRNCTVFGCNSEAV
KEQPAVDVTLWAPDIQPQHCCIQRLQVTTSDPQQDGRKRPGVTILKPFHGALVKRNGAVV
NQEVELHSGDVIGLGEAYLFMFKDPNTDILGNSPTGSLSVLPDSPEPHPPTSFPLYQTLM
LSTSKGSGTPCAPESTLPCLRDTNGQELVLYFDVEHKAQVLEEIFKQFRDREDLHKLTPS
FLMCLCLQQSATHFPMTDLRQLLLHLASEVQVTVLERAKELADIHSQMENIDQVELQPEN
LLRSLQPLVLWMANSIELLHFIHQSVPSLLHGISRMEEEEEEDCMAVLELRLSTVRPACE
EAMTVLEEVIMFTFQQSVYYLTKLLYPVLPSLLDTNPFSGNGQVQISNEVAGVLDIFKKT
LNLMKDYRVHPKISRQLFTYLFFFINAFLFNLLMERGSGGSFYHWSCGVQIRANLDVLID
WAYTAGLGELAQNHLHKLSSAVNLLATTREHLLQASWGSLRTEFSSLRPAQLHHVLREYN
LHRPCPSAWTPCSADADAACQTGDILENFDEHPPLVLPNDGFQLNLKKPIEDISLIRELV
QLQAVIKTFNVGTSTTQCAQCEFPELLEAKCTKTKVLPKALMEQGHAPLMLPKNCDSSTC
SSVSGDEGTCEVLLTPKVKALELQDREVNHNGGAKRSMRKSSCLLTPPNTPLSSERMKPE
TEHQHMKIHHHTCQCCDRTKQEKGGCGRHNEAGDDEVFMVKLLKGPEGLGLSLVDGVETP
MKTNGIYVKSVIPGSPAALNQRLRPGDRLLAINGDGLVGLDYHTGRDLIQKAGDLAQLLV
ARTVRTQEDLTHQCTLTQFWENAKI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgacgtggactgagcggaccttaaggagaacaggaaccgcacctccgtcacct
gcagccgcaccgatcagcgcagccaagaggagcctttccaaactcagccgcaaacacagc
aatggctctgtccaatccagagcgtcagttggcactgccatatctgcagagggtgtgggc
ttcaggcaaccagccaagagcagaatccgccgacatcaacaccgcctttcctctgtgttt
acccgtggtgtgctctcggctcgtggggacacgacgacaactggagaagaaccatcggta
acagacgatccctctgagctgtcaagtcacataacagcaccaggtatcctgaaggttttt
ggcacggagatctgcgaaggtgccaactataaaagtgtcctggcaacaacccattccagt
gccaaagaactggtgaaagaagcacttgagagatactctctgaacaaggccgatgccgat
gcctatgtcctgtgtgatgtgatcggctgcatcagggagcgagaatggaggagcgagtgt
gtgcgtgtggtgggagacaacgagcgtccgctgctcctgcagtcactttggaagcccaaa
gaaggctacgctcggcgctttgaaattcaaagcagagtcagtgccgaagagaagatctcc
agagacaaagatacagtgactgcagggatcaacgctcaagctcgtaaactgcagaagacg
cgctcacggggcagatcggtggtgtttggggggagtgggcatggcatcctcacagacatc
ggcctgagcctgtgtaggagtctcagtgaagcagatctcaggtcctcccctgagccccag
caaagccttaagagccaatcaggcggggaagaccctaaggcttacaaagagcttccctgt
gagtctggcagaaaagaagagctggggagcagcgatgacaactgcacacagtattccatt
catccgcccgtgcacttcccttacttcctgctacttcagggctacagttacagacaggac
ttcatcatctactctctaaatagaaactgcacagtttttggctgcaattctgaagcagtt
aaagagcagcctgctgtggatgtgactctttgggctcctgatatccagccacagcactgc
tgcattcagagactccaggtcacgacttctgaccctcaacaagatggcaggaaaagacca
ggagtcaccatcctgaagcccttccatggagctctggtcaagaggaacggagctgtcgtc
aaccaagaggtggagcttcattcgggggacgtcataggcttgggcgaggcttacctcttc
atgtttaaggatcccaacacagacattttgggaaactctcctactggatctctttcagtg
ctgcctgactcaccagaaccacatcctccaacatcatttcctctttatcagacacttatg
ctgtctacatccaagggctcaggaacaccctgtgctccagaaagcaccttgccctgtctg
agggacacgaacggacaagagcttgttctctattttgatgtggagcacaaagcacaggtc
ctggaggagatatttaaacagttcagagaccgtgaagacctgcacaaactcaccccatct
ttcctgatgtgtttatgcctccagcaatcagccacacactttcctatgacagacctgcga
caactactgctacatttagccagtgaggttcaagtaactgtattggaaagggccaaggag
cttgcagatattcactctcaaatggaaaacattgaccaagtggagcttcaaccagagaac
cttctgagaagcctgcagccgcttgtcctttggatggccaactctatcgagctccttcat
tttatccatcaatcagtcccttccttgttgcatgggatttcacgaatggaggaggaagag
gaagaagattgcatggctgtgttggagctgcgtttgtctacagtgcgtcctgcctgcgag
gaggccatgacggtcctggaggaggtcattatgtttactttccagcagtctgtctattac
ctcaccaagctcctgtacccagtcctccccagcctgttagacactaaccccttttcgggg
aatggccaagttcagatctctaatgaagttgctggtgtgttggatatctttaagaagaca
ctgaatctcatgaaagactaccgtgtacacccaaagatttccaggcagctcttcacatac
ctcttcttctttatcaacgccttccttttcaacctgctcatggagagaggatcagggggg
agcttttatcactggtcctgtggagttcagattcgtgcaaatttggatgtgctgatagac
tgggcttacacagcaggcctcggagaactggcacaaaatcacctccacaaactctcctct
gctgtcaatctgctggccaccactcgagaacatctgctgcaggcatcctggggttctttg
aggacagagttttcctcacttcgccctgctcagcttcaccatgtgctgagggagtacaac
ctacaccggccctgcccctctgcatggacgccctgcagtgcagacgccgacgctgcatgc
caaactggtgatattctggagaactttgacgaacacccgcctctcgtcctgcccaacgat
ggttttcagctgaacttaaaaaagcctattgaagatataagcctcattagagaactcgtg
cagcttcaggcagtcatcaagacatttaatgttggtacatcgactacacagtgtgctcag
tgtgaatttcccgaactcctggaagccaaatgtaccaaaacaaaggttcttccaaaagcc
ctaatggaacaaggacacgccccattgatgctgcctaagaactgcgattcttccacttgt
tcttcagtatcaggagacgagggaacctgtgaagttctactaaccccaaaagtaaaagct
ctggagctacaggacagagaggtgaaccacaatggaggagcgaagcgctcaatgcgtaaa
agctcgtgcttgctcacgccaccgaacacaccactgagctcagagcggatgaaaccagaa
accgaacaccaacatatgaaaatccaccatcacacttgtcagtgctgtgatagaacaaag
caagaaaaaggtggatgtggaagacacaatgaagccggcgatgatgaagtgtttatggtg
aagctgctgaagggccctgaaggactaggactgtctctagtggatggcgtggaaactcca
atgaagacgaatgggatttatgttaaatctgtgatcccagggtctccagcagctctaaat
cagaggctgaggccaggcgatcgtcttctggcgatcaatggcgacggattggtcggcttg
gactaccacactggcagggatctcatccagaaggcaggagacctagcacagttgctagtt
gcccggactgtaagaactcaggaagacctgacacaccagtgcactttgacacagttctgg
gaaaatgcaaagatttga
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