Silurus meridionalis (southern catfish): 124389323
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Entry
124389323 CDS
T08004
Name
(RefSeq) PH and SEC7 domain-containing protein 1-like
KO
K12494
PH and SEC7 domain-containing protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124389323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389323
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124389323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
CbiN
Motif
Other DBs
NCBI-GeneID:
124389323
NCBI-ProteinID:
XP_046710644
LinkDB
All DBs
Position
7:complement(20581787..20638573)
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AA seq
984 aa
AA seq
DB search
MQRWREQGENELQIINPVQKLGDSMSGEVEDQGVEKGTRELLTGHETGTSKQEQKQAEWR
RRQALLLGPVVLDEENEERAEVEQNGVPTSSPSSSGVTGSLGDHECLSPESSNNSNQTEH
ASSGIQSDSGSAVLGPSLHSQKIARAKWEFLFGTTTDTVSSEQEKKLCTAPPSCLSTPTP
PNYLPLQEAALRANHDVQRVEVELVTPPPAAPGTSPKTGIIRRTLKYSETDLDAVPLRCY
WETDIDEVLLADKDDSDSAFGSNRSVMGTSGTGSSPLGETAYKGTDGEEEDVVEEEKEDV
ASWASVRSQCDMRRQQASQKQDEEEILSMLFKRPCLNNGHSALKSPVLVKGPPQTSGDHM
DTFSHHFESILESQRAKGTSYNSLESLELMTSSSQTRLTFDLPTLTPQVKAQMYHSARQI
VELSFAPLAHAEMPSVSESVLTITGDTDATRAPSSERLSSGSDDRSAGHSWTSDNLFILP
REKSPRLATNVVLNQELNERLGLGSNDTLTSSNRADLEAAKRLAKRLYNLDGFRKCDVSC
HLCKNNDFSQMVAEEYLACFNFTGQTLDQALRTFLQEFVLKGETQERERVLAHFSHRYLQ
CNPILTLSEDSIHTLTCSLMLLNTDLYGPNIGKRMSCSQFIGNLEGLNNSQDFPKELLKA
LYNSIKNEKLQWTIDEELRKSFSELGEHREDTNSRDMKCTGRGIVPASGALLYKMGFLVR
KVHADSDGKRTPRGKRGWKTFYAILKGLILYLQKGEIQPDKQLSDEDLKNAVSIHHSLAV
RATDYHKRPNVFYLRTADWRVYLFQAPNAEQMQSWITRINTVAALFSAPPLPAAIGSQKK
FSRPLLPGSTSRHSQEEQVEAHEARFHATSTELAELRSYPPDRKVKGRELEEYRLREEYL
EFEKTRYETYSMLLRAKQRCESDDLSVFEAMLLAEGSLQRAQSSPSLQEISVTCSTRDKA
PSNTGNGTGTSQGQRHSYRQAVRK
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtggcgtgagcagggagaaaatgaactgcaaattattaacccagtccagaaa
ttaggggacagcatgtcaggagaagtggaggaccaaggtgttgaaaaaggcacaagggaa
ctgctgacagggcatgagacagggacttcgaaacaggaacaaaagcaggcagaatggaga
cgaagacaagctttgctacttggtcctgttgtactagatgaagagaatgaggaaagagca
gaggtggagcagaatggcgtaccaacttcatctccaagctccagtggtgtcacagggagt
ttgggagatcatgagtgtctctcacctgaatccagcaataacagtaaccagaccgaacat
gccagctcaggtatccagtctgatagtggctcagctgtactggggccatctctgcactcc
cagaagattgctcgagccaagtgggagttcttatttggaaccacaacagataccgtctcc
agtgaacaagaaaagaagctgtgcactgcaccccctagctgcctctccaccccaactcca
cccaattacctaccactacaggaagctgctctccgtgccaatcatgacgtgcagcgagtt
gaggtggagcttgtgacccctccacctgctgctccaggcacctccccaaaaacaggcata
attcgtcggacattgaagtactccgagacagatctagacgcagtccccttgcggtgttat
tgggagactgacattgacgaggtattactggctgacaaggatgactctgactcagctttc
gggagcaaccgtagcgtgatgggcacctccggtacagggagcagtccactgggagaaaca
gcatacaagggaacagatggagaggaggaggacgtggtggaagaggagaaggaggatgtg
gccagctgggcgagtgttcgctcacagtgtgatatgaggaggcaacaggccagtcaaaag
caggatgaggaagagatacttagcatgctgttcaagaggccctgtttaaataacggtcac
tcagctctgaaatcacctgttcttgtaaaaggtcccccccaaacttcgggtgaccacatg
gacacctttagtcaccattttgagagcatcctggagtctcagcgagcaaaaggcacctcc
tacaacagcctggagagcctggagctcatgacttccagttctcagaccaggctgacattt
gacctcccaaccctgaccccacaggtgaaggctcagatgtatcacagtgcacggcagatc
gtggagctgagctttgccccccttgcacatgccgagatgcccagtgtgtctgagtcggtt
ctgaccattacaggggacacggatgcaacaagggcaccgtctagcgaacggctcagcagt
ggctcggacgacagatcagctggacacagctggaccagtgacaatttgtttatactgcct
agggagaaatctccacgactggctacaaatgtggtcttgaatcaggagctgaatgagcgt
ttgggactgggaagcaacgacacactaaccagcagtaaccgtgctgacctggaggctgct
aagcgattggctaaacggctctacaacctcgatgggttcaggaagtgtgacgtctcgtgc
cacttgtgcaagaataatgacttcagccagatggtagcagaggagtacctggcttgcttt
aattttacagggcaaacgttggatcaggcactgaggacatttttacaggaatttgtgcta
aaaggagaaacacaggagagagagcgagtcctagcccacttctcacatcgatacctgcag
tgcaaccctattctcactctctctgaagacagcatccacacgctgacctgctccctgatg
ctgctgaacacagacctgtatggcccgaatattggcaagcggatgtcctgttctcagttc
attggaaacctggagggactgaacaatagccaggatttcccaaaggaacttctcaaggcg
ctctacaactccattaagaatgagaagcttcaatggacaattgatgaggagttgcgtaag
tcgttctcggagttgggagagcatcgtgaagacacaaattcaagagacatgaagtgcaca
gggagagggatagtgccagcatctggtgcacttctctacaagatgggtttcctggtacgc
aaagtccacgctgacagtgacgggaaaagaactccacgtggaaaaagaggttggaagact
ttctatgctatcctgaagggtcttattctttacctccagaagggtgagattcagcctgat
aagcagctttctgatgaagatctgaagaacgccgtgtccatccaccactcgctggctgtt
agagccactgattatcacaagcggcccaacgtgttctacctgcgcacggccgactggagg
gtctacctgttccaagctccgaatgcggaacaaatgcagtcttggattactcgcatcaat
acagtggcagcattgttttctgcgccgcctctcccagctgccattggttcccagaagaaa
ttcagtcgtccactgctaccaggctccacctccagacactcacaggaggaacaggtagaa
gctcatgaggctcgctttcatgccacctccacagagttggcagagcttcgctcataccca
cctgatcggaaggtcaaaggtcgtgagcttgaggaataccggcttagggaggagtatttg
gagttcgagaaaacacgatatgagacatacagcatgctactgagagcgaagcagcgctgt
gaaagtgatgatctgtcagtctttgaggccatgctgctggcagaggggtctctgcagagg
gctcagtccagccccagtctccaggagatcagtgtcacttgcagcaccagagacaaagct
ccttccaacacaggcaatggcacaggcacaagccaaggccagagacacagttatcgccag
gctgtcagaaaatga
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