Silurus meridionalis (southern catfish): 124389327
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Entry
124389327 CDS
T08004
Symbol
pax2b
Name
(RefSeq) paired box protein Pax-2b isoform X1
KO
K15608
paired box protein 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124389327 (pax2b)
04131 Membrane trafficking [BR:
smeo04131
]
124389327 (pax2b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124389327 (pax2b)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124389327 (pax2b)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
124389327 (pax2b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
124389327 (pax2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
124389327
NCBI-ProteinID:
XP_046710652
LinkDB
All DBs
Position
7:complement(20713328..20735403)
Genome browser
AA seq
410 aa
AA seq
DB search
MDIHCKADPFSAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRSACTIIPSGCCRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRHNPTM
FAWEIRDRLLAEGICDNDTVPSVSSINRIIRTKVQQQYHPSPDGTSLSTTGHTIVPSTAS
PPVSSGSSDPVGSYSINGILGIPRSNGEKRKRDDDGSEGSGQNSDSQGSVESLRKHLRAD
AFTQQQLEALDRVFERPAYPDVFHSSEHIKPEQSSEYALPALNPGLDEVKPSLSSSSSSD
LGASVSQSYPVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYT
AYNEAWRFSNPALLMHPEPLHHQLLPLLTTATRHCANQTQHRLGRPVVPV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctccgccatgcaccggcatggcggagtgaac
cagctgggcggtgtgttcgtgaacggcaggccgctaccggacgtcgtgcgccaacgaatc
gtggagctcgcgcaccagggggtgagaccgtgcgacatatcacgacaactgagagtcagt
cacgggtgcgtcagcaagatcctgggcaggtctgcatgtaccattattccttctgggtgc
tgcaggtactatgaaactgggagtataaagcccggagtgatcggtggctccaagccgaag
gtggccactccgaaagtggtggataaaatagcggactataagagacacaaccccaccatg
ttcgcctgggagatccgggaccggctgctggcagagggtatctgcgacaacgacacggtg
cccagcgtctcctccatcaacaggattattcgcactaaagttcaacaacagtaccaccct
tctcctgatggaacatctctctcaacaacaggacacactatagttcccagcacagcatcc
cctccagtatcaagtggatccagtgatcctgtgggttcttactccatcaatggtattcta
ggcatccctcgctccaatggagagaaaaggaaaagagatgacgatggttcagagggctct
ggacagaacagtgattcccagggcagtgtggagagtttaaggaaacacctacgtgccgat
gcgtttacccaacaacagctggaggccttggatcgagtgtttgagcgaccggcctaccct
gacgtcttccacagctcggaacacatcaagccagagcagagtagtgagtatgcccttcct
gcgctaaacccagggctggatgaagttaaacccagtctgtcctctagtagctcctcagac
ctgggtgccagcgtgtcccaaagctaccctgtaggtagagacatggccaacacaacatta
cctggctatccacctcacgtcccccctacaggacagggcagctacccaacatccacactg
gctggaatggttcctgggagtgaattttcagggaatccctacagtcacccacagtacaca
gcatacaacgaggcctggcgcttcagcaacccagccttactgatgcatcccgagcctctg
caccaccagctgctgccgctgcttacgaccgccactagacattgtgcaaaccaaacccaa
catcgccttggacgtcctgttgtgccagtgtga
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integrated database retrieval system
