KEGG   Silurus meridionalis (southern catfish): 124389403
Entry
124389403         CDS       T08004                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04137  Mitophagy - animal
smeo04144  Endocytosis
smeo04145  Phagosome
smeo04148  Efferocytosis
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124389403
   04145 Phagosome
    124389403
   04137 Mitophagy - animal
    124389403
   04148 Efferocytosis
    124389403
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124389403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124389403
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smeo04147]
    124389403
   04031 GTP-binding proteins [BR:smeo04031]
    124389403
Membrane trafficking [BR:smeo04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    124389403
 Endosome - Lysosome transport
    124389403
Exosome [BR:smeo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124389403
  Exosomal proteins of other body fluids (saliva and urine)
   124389403
  Exosomal proteins of colorectal cancer cells
   124389403
  Exosomal proteins of bladder cancer cells
   124389403
GTP-binding proteins [BR:smeo04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    124389403
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase MMR_HSR1 GTP_EFTU Gtr1_RagA AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 124389403
NCBI-ProteinID: XP_046710794
LinkDB
Position
7:1313245..1316443
AA seq 213 aa
MAGRPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCL
DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIIVYDITNTDTFVRAKNWVNELQKQASP
SIVIALSGNKADLANKRAVDFQEAQAYADDNGLLFMETSAKTAMNVNEIFMAIAKKLPKS
EPQAGGGGASGRGRTGVDLQDSTHQSSTGKCCN
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcgggtcgacccaacgggccggccgcggggaataagatctgccagtttaagctggtt
ctgctgggcgagtcggccgttgggaagtccagtctggttctgcgtttcgtcaagggccag
ttccatgagtaccaggagagcaccattggagcggcgttcctcacgcagaccgtctgtctg
gacgacacaacagtgaagtttgagatttgggacacagccggacaagaacgctaccacagc
ctggcgccgatgtactacagaggagctcaggctgccatcatcgtctacgacatcacgaac
acggacacatttgtacgagcgaagaactgggtaaacgagttgcagaaacaggcgagtccc
agcattgtaatcgctctgtctggcaataaagctgatctcgctaacaagagagccgtcgac
ttccaggaagcacaggcgtacgctgatgataacggcctgctgttcatggagacttcagcc
aaaaccgccatgaacgtcaacgagatatttatggccattgcgaagaagctgccgaagagc
gagcctcaagccggcggaggcggggccagtgggcggggacggacaggtgtagacctccaa
gactccacccatcagagctccactggcaaatgctgtaactga

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