Silurus meridionalis (southern catfish): 124389403
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Entry
124389403 CDS
T08004
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
smeo04144
Endocytosis
smeo04145
Phagosome
smeo04148
Efferocytosis
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124389403
04145 Phagosome
124389403
04137 Mitophagy - animal
124389403
04148 Efferocytosis
124389403
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124389403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389403
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124389403
04031 GTP-binding proteins [BR:
smeo04031
]
124389403
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
124389403
Endosome - Lysosome transport
124389403
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124389403
Exosomal proteins of other body fluids (saliva and urine)
124389403
Exosomal proteins of colorectal cancer cells
124389403
Exosomal proteins of bladder cancer cells
124389403
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
124389403
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
MMR_HSR1
GTP_EFTU
Gtr1_RagA
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
124389403
NCBI-ProteinID:
XP_046710794
LinkDB
All DBs
Position
7:1313245..1316443
Genome browser
AA seq
213 aa
AA seq
DB search
MAGRPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCL
DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIIVYDITNTDTFVRAKNWVNELQKQASP
SIVIALSGNKADLANKRAVDFQEAQAYADDNGLLFMETSAKTAMNVNEIFMAIAKKLPKS
EPQAGGGGASGRGRTGVDLQDSTHQSSTGKCCN
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgacccaacgggccggccgcggggaataagatctgccagtttaagctggtt
ctgctgggcgagtcggccgttgggaagtccagtctggttctgcgtttcgtcaagggccag
ttccatgagtaccaggagagcaccattggagcggcgttcctcacgcagaccgtctgtctg
gacgacacaacagtgaagtttgagatttgggacacagccggacaagaacgctaccacagc
ctggcgccgatgtactacagaggagctcaggctgccatcatcgtctacgacatcacgaac
acggacacatttgtacgagcgaagaactgggtaaacgagttgcagaaacaggcgagtccc
agcattgtaatcgctctgtctggcaataaagctgatctcgctaacaagagagccgtcgac
ttccaggaagcacaggcgtacgctgatgataacggcctgctgttcatggagacttcagcc
aaaaccgccatgaacgtcaacgagatatttatggccattgcgaagaagctgccgaagagc
gagcctcaagccggcggaggcggggccagtgggcggggacggacaggtgtagacctccaa
gactccacccatcagagctccactggcaaatgctgtaactga
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