Silurus meridionalis (southern catfish): 124389424
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Entry
124389424 CDS
T08004
Symbol
psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8 isoform X1
KO
K03066
26S proteasome regulatory subunit T6
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124389424 (psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124389424 (psmc5)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
124389424 (psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
RuvB_N
PRS7_OB
TIP49
AAA_3
AAA_18
AAA_28
AAA_17
Mg_chelatase
NPHP3_N
AAA_33
AAA_14
Parvo_NS1
FapA
ATPase
IstB_IS21
PhoH
AAA_24
AAA_7
DUF815
AAA_25
Sigma54_activat
APG6_N
AAA_11
bpMoxR
ABC_tran
DUF5906
RNA_helicase
Zeta_toxin
AAA_19
TsaE
HR1
DivIC
Motif
Other DBs
NCBI-GeneID:
124389424
NCBI-ProteinID:
XP_046710824
LinkDB
All DBs
Position
7:complement(1829747..1834342)
Genome browser
AA seq
408 aa
AA seq
DB search
MRDEVLSSFQMEMEDSKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRL
LREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRN
DSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEAL
GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMA
REHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI
DILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAE
VKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagagacgaggttttatcatcattccagatggagatggaggacagtaaaggaggttct
ggtctccggcagtattacctatccaaaattgaggagttacaactgactgtgaacgagaag
agccagaaccttcggcgtctgcaggcccaaagaaacgagctcaatgctaaagtgcgtctg
cttcgtgaggagctgcagctgctgcaggaacagggctcttacgtgggcgaggtggtccga
gccatggacaagaagaaagtgctggtgaaggttcatcccgaggggaaatttgtggtcgac
gtggacaagaacatcgacattaacgatgtgacaccgaactgccgggtggcgctccgtaac
gacagctacacactgcacaagatcctccccaacaaggtggaccctctggtgtcgctcatg
atggttgagaaggtccctgactctacctatgagatgattggtggcctggacaagcagatc
aaagagattaaggaggtgatcgagctgcccgtcaagcaccctgagcttttcgaagccctc
gggatcgcgcagccgaagggggtgctgttgtacggacctcctggcaccgggaagacgctg
ctggcccgagccgtggctcaccacactgactgtaccttcatccgcgtgtctggctctgag
ctcgtgcagaagttcattggagagggtgcacgcatggtacgtgagctgtttgtaatggca
cgtgaacatgccccctcaatcatcttcatggacgagatcgactccatcggctcttcacgt
ctcgagggaggctctggtggagacagcgaggtgcagcgcaccatgcttgagctcctcaat
caactcgacggcttcgaggccaccaagaacatcaaggtcatcatggccaccaatcgcata
gacatcctcgactctgcccttctccgacctggccgcattgaccgaaagatcgagttcccc
cctcccaatgaggaggcccgtctggacattctgaagatccactcgcgcaaaatgaacctg
acacgtggcatcaacctgcgcaaaatcgctgagctcatgccaggggcatcaggtgctgag
gttaagggggtttgtacagaagccggcatgtacgccctgcgagagagaagggtccacgtc
actcaggaagatttcgagatggctgtcgcaaaggtgatgcagaaggacagcgagaagaac
atgtcgatcaagaagctctggaagtag
DBGET
integrated database retrieval system
