KEGG   Silurus meridionalis (southern catfish): 124389625
Entry
124389625         CDS       T08004                                 
Name
(RefSeq) signal recognition particle 54 kDa protein-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03060  Protein export
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    124389625
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:smeo02044]
    124389625
Enzymes [BR:smeo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     124389625
Secretion system [BR:smeo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   124389625
  Eukaryotic Sec-SRP protein
   124389625
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA nSTAND3 cobW ResIII DUF2209 AAA_33 SRPRB AAA_22 NPHP3_N AAA_17 AAA_30 MobB nSTAND_NTPase5 APS_kinase AAA_19 DUF4300 PduV-EutP AAA Zeta_toxin nSTAND_NTPase7 6PF2K CitG ATP_bind_1 Thymidylate_kin AAA_16 AAA_31
Other DBs
NCBI-GeneID: 124389625
NCBI-ProteinID: XP_046710980
LinkDB
Position
8:16134115..16142060
AA seq 498 aa
MVLAAMGRKITAALRSLSNATIINEEVLNAMLKEVCAALLEADMNIKLVKQLRENVKATI
DLENMPSGLNKRRMIQHAVFKELVKLVDPGVKSWTPTKERNNIIMFVGLQGSGKTTTCTK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK
TENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIVDFEPFKTQPFISKLLGMGDI
EGLIDKFNELKLDDTVELLTIDRLKHGQFTLRDMYEQFQNIMKMGPFGQIIGMIPGFGTD
FLSKDNEQKSVARLNKFLTIMDSMNDQELDNKDGAKLFSKQQNRVQRVARGAGVATRDVQ
ELLTQYTKFAQMVKKKGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRLLHHMGGMA
GLQSMMRQFQKGASGNMK
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggtgttagcagccatgggaaggaagataacagcggcgttgcgctccctcagcaatgcc
accattatcaacgaagaggttttaaatgctatgctaaaagaggtctgtgctgccctgtta
gaagctgacatgaacatcaaactggtgaagcagctcagagaaaatgtcaaggcaaccatt
gaccttgagaacatgccctctgggctgaataagaggcgaatgatccagcatgctgttttc
aaggagcttgttaagctggtggaccctggtgtaaaatcatggacacctacaaaagaaagg
aacaacatcatcatgtttgttggtcttcagggtagtggaaaaaccacaacatgtactaag
ttggcatattactaccaaagaaaaggatggaaaacatgcttgatctgtgctgacactttt
agagcaggtgcctttgatcagcttaaacaaaatgcaacaaaagccagaattcccttttat
ggaagttacacagagatggatccagtcataatagctgctgagggagttgaaaaattcaag
acagaaaactttgaaataatcattgttgacactagcggaagacataagcaagaagattca
ctgtttgaagaaatgttgcaggtttcgaatgctgtgcaacccgacaacatcgtgtacgtg
atggatgcatctattggtcaggcttgtgaggctcaggctaaggccttcaaagacaaggta
gatgtggcgtccgtcattgttactaagctggatggccatgctaaaggtggtggtgctctt
agtgcagttgctgccacaaagagtcctatcattttcattggcacaggcgagcacattgtt
gactttgagccttttaaaactcagcccttcataagcaaactgcttggcatgggagacatt
gagggacttatagataaatttaatgaactcaaacttgatgacactgtggagctactgaca
attgacagacttaaacatggtcagttcacactcagggacatgtatgagcagttccagaac
atcatgaaaatgggaccctttgggcaaatcataggtatgatcccaggctttggaacagac
ttcctgagtaaagacaatgaacagaagtctgtggccaggctaaataaatttctgaccata
atggacagtatgaatgaccaagaactggacaacaaagatggtgcaaagttgttcagtaag
cagcaaaaccgggttcagagggtggcacggggtgcaggtgtagccaccagagacgtgcag
gaactacttacccagtacacgaaatttgctcagatggtcaaaaaaaagggtggcattaaa
ggtttatttaaaggaggcgatatgtccaagaacgttaacccatctcagatggccaaactg
aaccagcagatggcaaagatgatggatcccagactgctgcaccacatgggtggcatggct
ggtctacagtcgatgatgagacagtttcagaaaggggcgtctggcaacatgaaatga

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