Silurus meridionalis (southern catfish): 124389628
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Entry
124389628 CDS
T08004
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124389628 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124389628 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
LRR_5
Ig_3
I-set
LRR_4
LRR_1
ig
LRR_9
Ig_2
DHU1_N
C2-set_2
fn3
Sp38
C2-set_3
Ig_DSCAM-DSCAML_C
LRR_Zer-1
LRRCT
OAD_gamma
Ig_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124389628
NCBI-ProteinID:
XP_046710983
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Position
8:705452..746785
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AA seq
775 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFTDLENLRALHLNHNRLTRIGNDTFS
GMSKLHHLILNNNQLTHIHLGAFNDLLALEELDLSYNNLETIPWEVIQKMISLHTLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGVLTSSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCATPPHLSGRYFWSIPEEEFLCEPPLITRHSQEMRVLE
GQRVTLRCKARGDPEPVIHWISPDGKLVSNSSRTIVYNNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELVIIKLPYISNSTNNIQEPDPGSSDISTSSRTGANGSNHTADSKASSDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYLHCHFMQSQFLGGTMILIIGGIIVA
SVLVFIIILMIRYKVCISGDRAKGSAAGVQPDATPSPSANKEGAMAPEGGEDCQKSSALG
FPDSLTRSSETSLPDCSTETSVVSQSWDTGGSSGSVKPKRRPASKPEEKPEPPLGADTHN
TNRNNSKTPLLRSVPPSGPAPVLPSCFRDTPILRRAPPRPSVSKYLTLPAGGTRSAPRRY
SLHEDLSEHQRYAGKPGNVRCKRSVSMNGMLAFAGTSELDKGVYSSSEWILESTV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagctgctggtttgcctgttggtcatcgggatggcagtgaaggcccagatctgt
ccgaagcgctgcgtgtgccagatcttatcacccaacctcgcgacactttgcgccaaaaaa
gggctcctgtttgttccacccaacatcgaccggcacacggtggagctccggctcgcggac
aactttgtaacgagcgtcaaacgaaaagacttcgccaacatgaccagacttgtagacctc
accctgtcaagaaacactataagttacattactcctcatgcattcacagacttggagaac
cttcgcgccttgcacttgaaccacaacaggctgactcggatagggaacgacacgtttagc
ggcatgtccaagctgcatcatttgattctcaacaacaatcagttgactcacatccacctg
ggagcgtttaatgaccttctggctctagaagagctggacttgtcctataacaacctcgaa
acgataccctgggaggttattcagaagatgatcagtcttcatacactcagcttggaccac
aacatgattgattacattccagaaggcactttttccctgttgcaaaaactcaaccgcctg
gatgtgacctccaacaagctccagaagcttcctccggatcctcttttccaaagggcgcag
gttctggctacatctggagtgcttacttcttcatcatttgccctcagttttggtggaaat
cctttgcactgcaattgcgagctgctctggcttcgccgtctgagccgcgaggacgatctg
gagacttgcgccactccgccgcacttatctggacgctatttctggtcgattcccgaggag
gaattcctgtgtgagccacctcttatcacaagacactctcaagagatgagggtgctcgag
ggtcagcgcgtgacccttcgatgcaaagcgagaggagatccagagcccgtgatccactgg
atatccccagacggcaagctggtctcaaactcctcacgtaccattgtttacaataacggg
accttggatattttgatcagcacagtaaaagataccggatccttcacttgtatctcttct
aacccggccggtgaagcccaccaaaccgtcgagcttgtcattatcaagcttccctacatc
agcaacagcaccaataacatccaggagcccgacccgggatcgtcggatatttccacgtcc
agtagaacaggagcgaatgggagcaaccacacagcagactcgaaagcgagctcggataaa
cgcgtggtgatcgccgaggccacttcctccaccgcactcattaaatttaactttcaaagg
aatattcctggaattcgcatgtttcagatccagtacaatggcagctacgacgactcgcta
gtttacagaatgattccaccgacgagcaaaaacttcctggtgaacaacctggcagccggg
actcagtacgacctctgtgtcctggccatttacgatgatgtcatcacatcactcactgcc
acgcgtgtcgtcggctgcgtacagttcaccaccgagtccgagtaccttcactgccacttc
atgcagtcgcagttcctcggaggaaccatgatcctgatcatcggcggcatcatcgtggcc
tctgtcctggtcttcataatcatcctcatgatccgctacaaggtgtgtattagtggagat
cgcgccaaaggatccgccgccggggtgcaacccgacgccacccccagtccctccgcaaat
aaagagggcgccatggctcccgagggaggggaggactgccagaaaagctccgccctcggc
ttcccagattccctcactcggtcgtcagagacgtctcttccggattgttccaccgagacg
tccgtggtgagtcagagctgggacacggggggatcttcagggtccgttaagccaaaacgg
agaccggcgtcgaaacccgaggagaagcccgaaccgccgctcggcgccgacacccacaac
accaatcgcaacaactccaaaacaccccttctgcgttcggttcctccgtctggccccgcc
cctgtgctgccttcttgcttcagggacacgcccattttgaggagggcaccgccccgtccc
tccgtatccaagtatctcacactgccggcgggagggacgcgatccgccccacgcaggtac
tccctacacgaagacttatccgaacaccagcgctatgcgggcaaacccgggaacgttcgc
tgcaagcgcagtgtgtccatgaacggaatgctggccttcgcgggaacctcggagttagat
aaaggggtgtattccagctcggagtggatcctcgagagcacagtgtga
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