Silurus meridionalis (southern catfish): 124389659
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Entry
124389659 CDS
T08004
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a
KO
K03062
26S proteasome regulatory subunit T2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124389659 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124389659 (psmc1a)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
124389659 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_3
AAA_28
AAA_25
ATPase
AAA_14
RNA_helicase
NPHP3_N
TIP49
NB-ARC
NACHT
AAA_33
IstB_IS21
Prot_ATP_ID_OB_N
Mg_chelatase
ABC_tran
Parvo_NS1
AAA_24
SLFN-g3_helicase
AAA_7
Zeta_toxin
TsaE
Motif
Other DBs
NCBI-GeneID:
124389659
NCBI-ProteinID:
XP_046711023
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All DBs
Position
8:15704951..15709241
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AA seq
440 aa
AA seq
DB search
MGQNQSGGHGPGGGKKDDKDKKKKYEPPIPTRVGKRKKKTKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTLANDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggacagaatcagagtggaggacatggccctggaggggggaagaaagatgataaagat
aagaaaaagaaatatgagccccccattcccaccagggttgggaaaagaaagaagaagacg
aaaggtccagatgctgcaagcaagcttcctttggtgactccccacacacagtgcagactg
aagctgctgaagcaggagaggatcaaggactatctactgatggaggaggagtttatccgg
aaccaagaacagatgaaaccgcttgaggaaaaacaggaggaagagaggtctaaagttgat
gacctgagaggcacgcccatgtcagtaggaacactcgaagagatcattgatgataaccat
gcgatcgtgtctacatcagtgggctcggagcactacgtcagcattctgtccttcgtagat
aaagaccttctggaaccaggctgttctgttttactgaatcacaaggtgcacgcagtgatt
ggtgtgctgatggacgacacagatcctctggtaactgtgatgaaagtggaaaaggctcct
caagagacatacgctgatattggaggtctagacaaccaaattcaagagatcaaggagtca
gttgagcttccgcttacacacccagagtattatgaggaaatgggaataaagcctcctaaa
ggagtcattctgtatggtgcaccagggactgggaagaccctgctggctaaagctgtggcc
aatcagacatctgcgacgttcctgagggttgtgggttcagaacttattcagaaatatcta
ggcgatggcccaaaactggtgcgagagcttttccgagtcgcagaggagcatgccccctcc
atagtctttatcgacgagatcgatgccattggaactaaacggtatgactctaactctggt
ggagagagggagattcagaggaccatgttggagctcctgaatcagctggatggatttgac
tcgcgtggtgatgttaaagtaatcatggctactaatcgcatagagacgctcgacccagct
cttatccgtccaggtcgaattgaccgtaagatagagttcccactgcctgatgagaagacc
aagcgcagaatcttccagattcataccagtaggatgactcttgcaaatgatgtaaccctt
gacgaccttatcctggcaaaagatgacctttccggcgctgacattaaggcgatatgcaca
gaagcagggcttatggctctgagggagaggagaatgaaagtaacaaatgaggacttcaag
aagtccaaagagaatgtgctctacaaaaaacaagaagggacaccagaaggcctctacctt
tag
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