Silurus meridionalis (southern catfish): 124389708
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Entry
124389708 CDS
T08004
Symbol
gabrr2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2a isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124389708 (gabrr2a)
04082 Neuroactive ligand signaling
124389708 (gabrr2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124389708 (gabrr2a)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
GABA-A
124389708 (gabrr2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124389708
NCBI-ProteinID:
XP_046711110
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Position
8:complement(3189970..3205729)
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AA seq
482 aa
AA seq
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MPALELLLIVALCLVPVEECRSHSAAREKRGVPLAKKPPDVTKSRKVKTEQLLRVDDHDF
TMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSFTSTTNKSMTFD
GRLVKKIWVPDVFFVHSKRSFIHDTTTENIMLRVFPDGHVLYSLRVTVTAACNMDFSRFP
LDSQTCSLELESYLWRSLDRWVSCNVCCNLSITDAYTDEDLMLYWKSGDESLSTDDRISL
SQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAV
NYLSTVQDRRERKLRERVRAQSLSCTCGLSHTRTMMLDGTCSEADANSLAGYTDAPMMPQ
EVEKREHMVVHLSVSNTSTATKKKGLRNFSIIQNTHVIDKYSRMIFPGSYIFFNLIYWSV
YC
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctggagctcttgctgattgtagccttgtgtctggtaccggtggaggagtgc
aggagtcacagcgcagcgcgtgagaaacgcggagtccctctggcaaagaagcccccagat
gtgaccaaatccaggaaggtgaaaacagagcagctactcagggtggacgatcatgacttc
accatgagacccgcttttggaggtcctgctattcctgtgggcgtcgacgttcaggtcgaa
agcttggacagcatttcagaagtagacatggacttcaccatgaccctatacctcaggcac
tactggaaggacgagcgtctgtccttcaccagcaccaccaacaaaagcatgaccttcgat
ggacgcctggtgaaaaagatctgggtgcctgatgtgtttttcgtgcactcgaagagatcc
ttcatccatgacactaccaccgagaacatcatgctgagggttttcccagatggccacgtt
ctctacagcctgagagtaacggttacagccgcctgcaacatggacttcagccgatttccg
ctggactcgcagacctgttctctagaactcgagagctatctctggcgctccttggaccgt
tgggttagctgtaatgtctgctgtaatctctccatcacagatgcttacacagatgaggat
ctgatgctgtactggaagagcggggacgagtctctgagcacggacgacaggatctccctc
tctcagttcctcatccagaaattccacactacctcgcgtctggctttctacagcagcaca
ggctggtacaaccggctgtacatcaacttcacgctgcggcgtcacatcttcttcttccta
ctgcagacatatttcccagccacgctcatggtcatgctgtcctgggtttccttctggatc
gaccgcagagccgtgccggcccgagtctccctgggtatcactacggtgctcacgatgtcc
acgatcatcaccggcgtgaacgcctcaatgcctcgagtgtcctacattaaagctgtggac
atttatctgtgggtcagctttgtgtttgttttcctttccgtcctcgagtacgccgcagtc
aactatttgtccactgtacaggataggagagaacgcaagctccgcgagcgtgtccgagcg
cagtcgctgtcctgcacatgtggcttgtcccacaccaggaccatgatgctggatgggacg
tgcagtgaagcagacgccaatagcctggccggctacaccgacgcccccatgatgccccag
gaggtggagaaacgtgagcacatggtggtgcacctgtcggtcagcaacacctcgacggct
accaagaagaaaggactgcgcaacttcagcataatccagaacacgcacgtcatcgacaag
tactcgcgcatgatctttcccggatcctacatctttttcaaccttatatactggtccgtt
tattgctga
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