Silurus meridionalis (southern catfish): 124389730
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Entry
124389730 CDS
T08004
Symbol
tulp4b
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124389730 (tulp4b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
Tubby family proteins
124389730 (tulp4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
124389730
NCBI-ProteinID:
XP_046711144
LinkDB
All DBs
Position
8:complement(16819769..16834174)
Genome browser
AA seq
1880 aa
AA seq
DB search
MSRDYEEPGNSVGMLAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLA
TGNARGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDMEGGIF
VWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALIAYRDGFVLVGSVSGQRHWSSEINLE
SQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGIVGMSWNCPDFLVEDS
TESDTDSDENTPNQARNVKPLLTVSFISGDISLMNNYDDLSPNIIHSGLKDVEVQWCSQG
DLLAVAGMERHGLPSDSACSSMMRNALVKFYNVQGEHIYTLETPAQRPITTICWGHRDSR
LFLACGPALYVVRVEHRVASLQLLCQQGIASALREERDVSKLNMPSLLCSYVTSAFIPTI
KPPIPDPNNIRDFVSYPTGGNERLHCTMKRAEENPEAGGPCYTLYLEHLGGLVPILKGRR
ISKLRPEFVIMDPKMDSKTDEVCVNGMLSYMTDSCNCSDSSDIELSDEWVERKSPKLSRG
NRSPKLPRISMESRKSPKLAQTQELSRSPRLPKKATIRSPSLTRREFPIDGISEHNYLAQ
VTSNIWGTKFKIVGLASFLPANLGAVIYKTSLLHLQPRQMTIYLPEVRKISLDFMSLPVF
NPNVFSEDEDDLPVMGPSGVSSDNPPCTVNIPIAPIHSPAQAMSPTQSIGLVQSLLANQN
IQLDVLTNPTATAAAATAAAAAKAPVPDHSADNVTAQYTVPTRYSSPGQVIFSGLEMGNL
SLNGTLPPPPHHLPPQPHQQQRQQQQQQQQEEHHQTSKHQQHTQTQQQHLKLQQHQQAQQ
QHQQPMQHHQQHLQHQQQIQTQHHQQIQQHIQQQHQQQMQQHHHQIQQQQLQQHHQHLQQ
QHLQQQHLQQQHLQQQQLQQQHLQQQHLQQQHLQQQQLQQQQLQQQQLQQQIHQQQVQHH
HQQMQQQQHQMHLQHEQMQQQQQQIRQQIQEMRQQQQQLQQQHQQMQQQHQQMQRQHQQM
QQQLKMQISIPPPPSGYASIPMHQLQMMPAISHPDQPPERAEQAHTLKVPSRPQSFIEND
NSLEIQMRKMNPPPPYPGTVVSAAAAGPPVQPGLIGNSENANTLSADSCLSKDEFSLHPV
SIQYPTPLGYERITTFDSSGNVEEVCRPRRRLIRNQNAYGLQGMGSSATLKVTSSENKKV
QLPYSSATLSRLSVPRYSIPSGDPPPYPDPANQINVNRSPTQRIESSLIHATLRRDRREN
SLKVPQMVDTARTLPTKSKVNSALALSYQPRIPTALYTCTQCSSNSSSTSVSVSGGGSNS
SGIAGGTVVRQDFPPGKGAQHSTIIVHSKSSSTLASQSSYNLLSPVDNSRDRTVYINSAF
TEDETLNQQCHLEKSMRHLTLGDVSLTVKRPPPYQWDSPSSDQIWMAQDQNMLTNPPGPH
KPPHLLLSQAQHLDITRLPFVLSAKPPSSPSSITMPSSYQISLSPFPPGVGHSGAQFQPL
QNTPQPCGPNDMVTSMPFSQQDPSLVLPPGYANNLASLPCCPLPPMYPGASSCTNLQLHP
MALHPWSTYSACPPMPDHSATLPSKMHQTLEKPILSPPPPPPPPPPPPPPPPPLPPPPPP
AELMAHQSTSEVLADSGESFQEQSSLNESPVQQGSDRFSKKSRKRLDSRAEEAGMSNVSE
SKSKKEGRALADFNSLIASPRLSGREKKKPKGQKEQLNKAKKLSRTTNEFQDSSESEPEL
FISGDELMNQSQSSKKGWKSKRSLRTANELEEIKCRKANEREDRSLGSQGFVYVMANKQP
LWNEATQVYQLDFGGRVTQESAKNFQIELDGRQVMKVSWQSSTHIVFFSPYSLGFAVQSH
HKCIQVVLYLRWRYVTTTPS
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggactatgaagagcctggcaattcagtagggatgttggcagcagtggaacat
ggtcctgtcctctgcagcgactccaacatcctctgcctctcatggaaaggaagggttccc
aaaagtgagaaggaaaaaccggtgtgcagaagacgttactatgaagaaggttggctggcc
accggaaatgcgaggggcgttgttggagtgactttcacttctagtcactgcaggagggac
aggagtacaccacagagaattaattttaatttaagaggccacaacagtgaggttgtcctc
gtccgctggaatgagccgtttcaaaagcttgcaacatgtgacatggaaggggggatcttt
gtgtggatacagtatgaggggcgatggtctgtggagctggttaatgatcggggagctcag
gtaagtgactttacctggtctcatgatggaactcaggccctgattgcctacagagatggc
tttgtcttggtgggctcagtcagtgggcaaaggcactggtcatctgagatcaaccttgag
agccaaatcacctgtggaatatggacccctgatgaccaacaggtgttgtttggaacagca
gatggacaagtaattgtaatggactgtcatggtcggatgcttgctcatgttctactgcat
gaatcggatggaattgtgggcatgtcctggaactgccctgactttctagtggaagacagc
actgagagtgatacagattctgatgaaaataccccaaaccaagcacgtaatgtgaagccc
cttctcacagtaagcttcatatctggagacataagtttaatgaacaactatgatgacctt
tcacctaatattatccactcaggactaaaagatgtggaggtgcagtggtgctctcaggga
gacttgttagctgttgctggaatggagagacatgggctgccttctgactcagcctgttcc
tctatgatgagaaatgccctagtcaagttctacaatgtccaaggagaacatatatatact
ttggaaacacctgcacagaggcccatcactactatatgctggggccacagggactcacgg
ttgtttctggcttgtgggccagcactgtatgttgtacgggttgagcacagggtggccagt
ctccagctgctgtgtcagcagggcatagccagtgccctaagagaggagagagatgtgagc
aaactgaacatgccatctctcctctgttcctacgtcaccagtgcattcatcccaacaatc
aagcctcctattcctgatccaaacaacattcgtgattttgttagctaccccacaggggga
aatgagagattgcattgcacaatgaaacgtgccgaggagaatccagaggcaggagggcca
tgctatactctctatttggagcatttggggggtctggtgccaattctcaagggccgtcgt
atcagcaaactgcgtccagagtttgttataatggaccccaaaatggacagtaagacagat
gaggtctgcgtgaatggaatgttatcctacatgaccgacagctgcaactgctctgactct
agtgacattgaattgagtgacgaatgggtggaaagaaagtcacctaaactttctagagga
aacaggtcacccaaacttccaagaatcagtatggaatcaagaaagtctcctaaacttgcc
caaacccaagaactgtccaggtctccaagattaccaaagaaagccactattcgatctcca
agtctcactcggagggagttcccaatagatggaataagtgagcataattatctggctcaa
gtcacttccaacatttggggtacaaagtttaagattgtaggacttgcatcttttttgcca
gcaaatttaggtgcagttatctacaaaaccagtttgttgcacttgcaaccacgtcagatg
acgatatatctaccagaggtccgaaagatttcgcttgatttcatgagtctaccagtcttc
aatcccaatgtatttagcgaagatgaagatgatttaccagtcatgggcccttcaggggtg
tcaagtgataatcctccctgcacagtcaatatacctattgctcctatacatagtcctgct
caagccatgtcacccacacagagcattggtcttgtgcagtctctattagcaaatcagaat
attcagcttgatgtcctgaccaatcccacggctacggctgctgcagccactgctgcagca
gcggcaaaggcaccagttcctgatcatagtgcagacaatgttacagcgcagtacactgtg
ccaacaagatactctagtcctggacaagttatctttagtggccttgaaatgggtaacctt
agtttgaatggaacactcccaccaccgccacatcatttgccaccgcaacctcatcagcaa
caacgtcagcagcagcagcaacaacaacaagaagagcatcatcaaacatcaaaacatcag
cagcatacacagacacaacaacagcatctgaagttacaacagcaccagcaagcacaacag
caacaccaacaaccaatgcaacatcatcaacaacatctgcagcaccaacaacaaatacaa
actcagcatcatcagcaaattcaacagcacattcaacagcagcatcaacagcaaatgcaa
cagcatcatcatcaaatacagcagcagcaactacagcaacatcatcagcatttgcaacaa
cagcatttgcaacaacagcatttgcaacaacaacatttgcaacaacaacaactgcaacag
cagcatttgcaacagcaacatttgcaacagcaacatttgcaacagcagcagttgcaacaa
cagcaattgcaacaacagcaattgcaacagcaaatacatcagcagcaagtccaacaccac
catcagcaaatgcaacagcagcagcatcagatgcatcttcaacatgagcaaatgcaacag
cagcagcaacaaattcgccaacagattcaagaaatgagacaacagcagcaacagcttcag
caacagcatcagcaaatgcaacagcaacatcaacaaatgcaaagacagcatcaacaaatg
cagcaacaactcaagatgcaaatatccataccaccgcctccttcagggtatgcctccatt
cccatgcatcagctgcagatgatgcctgcaatttctcatccagaccaaccaccagaaaga
gcagagcaggcacacactctgaaggttccttctagaccacagtctttcattgaaaatgac
aactctcttgaaattcaaatgcgtaaaatgaatccaccacctccataccctggcacagtg
gtatctgcagcagcggcaggtcccccagtccagcctggtctaattggaaacagtgagaat
gctaacacactgtcagcagactcatgtctatccaaggatgagttttctcttcacccagta
agtatccagtacccgacacctcttggttatgaaaggattacaacttttgacagcagtgga
aatgtggaggaggtctgtcgcccaaggagacgtcttatacgaaaccagaatgcctatggc
ttgcaaggaatgggcagttcggctacattgaaagttacctcttctgaaaataaaaaagtc
cagcttccttatagctcagcaactctcagtcgcctttcagtgcctcgatattccatacca
agtggagatcctccaccatacccagaccctgctaatcagatcaatgtcaataggagtcct
acacaaaggattgaaagcagtcttatccatgctactctgcgacgggatcgcagagaaaat
tctctgaaggttccccaaatggtggatacagcaaggactctaccaaccaaatctaaagtt
aatagtgctcttgcactttcttaccagcccaggattcccacagctttgtacacttgcact
cagtgcagcagtaatagcagcagcacaagtgtaagtgtcagtggtggtggaagcaacagc
agtggcattgcaggggggactgttgtgcggcaagattttccccctggcaaaggggcacaa
cacagtaccataattgtgcactctaaaagttcttcgactctggcttcacaatcctcttat
aacctactgagccctgttgacaacagtagagacaggactgtatatatcaactctgccttt
actgaagatgagactctaaaccaacagtgccacttggaaaaatcaatgcgtcatttaact
ctcggagatgtcagtttaacagtgaagcggccaccaccttaccagtgggattctccttct
tcagaccaaatatggatggcccaggatcaaaatatgctgaccaacccaccaggacctcac
aaaccacctcatcttttactcagccaagcacagcacttagacataactcgactacctttt
gtcctctcagcaaaacctccctctagtccaagttcaattaccatgccatcaagttaccag
atttctctgtcaccttttccccctggtgtgggacacagtggtgctcagtttcagccattg
caaaatactcctcagccttgtggccccaatgacatggtaacatcaatgccatttagccag
caggatccatctcttgttttgccccctggttatgcaaataatctggccagtcttccctgt
tgcccactccctcctatgtatcctggagcaagctcatgcaccaaccttcagcttcatcca
atggctttacatccttggagcacatacagtgcttgccctcctatgccggatcactcagca
actttaccaagtaaaatgcatcaaactttggaaaagcccatactctcacccccaccacct
ccgccacctcctccaccaccaccacctcctccacctccactccctcctcctcctcctcca
gctgaacttatggctcaccaaagcacctcagaggttttagctgactctggtgagagtttt
caggagcaatcatcacttaacgaaagtccagtgcaacaggggtcagacaggtttagcaaa
aaaagccgcaaaagacttgacagcagagcagaggaggcgggtatgtccaacgtttcagag
agtaagtcaaaaaaggaaggtcgtgctctggctgactttaattctctcattgctagtcca
aggcttagtggcagagagaaaaagaagcctaaaggacagaaagagcaactgaacaaggcc
aaaaagctgagcaggaccacaaatgagttccaagacagctctgaaagtgagccagaactt
ttcattagtggcgatgaattaatgaatcaaagccagagcagcaagaaaggttggaaaagc
aagcgtagtctgcgcacggcaaatgaactcgaggagattaagtgccgcaaggcaaatgag
agagaagatcgaagtcttggcagtcagggctttgtgtatgttatggccaacaaacagcca
ttgtggaatgaagctactcaagtctaccagcttgactttggtggaagagtgacacaggaa
tcggccaaaaattttcagattgagctggatggacgacaagtgatgaaggtttcctggcag
tcctccactcacattgtcttctttagtccatactcattgggatttgcagtgcaaagtcat
cataagtgtatacaggtagtcctctacttacgatggagatacgttacgacgactccatcg
taa
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