Silurus meridionalis (southern catfish): 124389830
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Entry
124389830 CDS
T08004
Symbol
ttc27
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 27
KO
K24935
tetratricopeptide repeat protein 27
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124389830 (ttc27)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
124389830 (ttc27)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_1
TPR_8
TPR_16
TPR_9
TPR_CcmH_CycH
TPR_7
TPR_19
TPR_11
TPR_17
TPR_12
ANAPC3
ARM_TT21_C
TPR-S
Clathrin
BTAD
TPR_15
Sel1
ChAPs
DUF6664
Motif
Other DBs
NCBI-GeneID:
124389830
NCBI-ProteinID:
XP_046711306
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All DBs
Position
8:complement(28667629..28733394)
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AA seq
848 aa
AA seq
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MERSVEIEAAVLRGFLTEREKSEWGQSFFNTADGGPLLKSVFEGDFEAVLLSGPVLEMLS
GEPEQDENIELYLQRCIITYLSSNDEETRKDRELAMLALAVSCLHLFVQSNWTGPPFVLH
VSDFLPAALLDKHKEAGAVTSVLLSSLVLDGESVYSLLSNPFLLLVAQVLLVSCAEKMDN
LQLLPWWTLRYVALHQQVLEEKSPQLYSLAKSSVEKVCKLEELLSGKTRRTLAMMFHLEC
SYTFLSYYEYRRAKEHLQKAQDLSGLHINMTGALGKRTRFQQNFLAQLILDVRRKDESFI
PDSEFSLPPTPTSLLPKDHQLNDDTVLNQINLAAPSDHQLPELSAEEQALILGVCTDFQK
NNPVHKLNDEELLAFTTCVLSQPKFWVVEVTALCLRSKMERSSSRRVERXMMQTQTLVDF
FLEKTCPVSERLKIFYSCRAPPHWDLQRQLASLLTDLGLTSSALLIYEKLELWEDAVICL
ERMGKHGKAEEILRRELEKKETPSLYCLLGDVLKDPQYYDRAWKLSNQRSARAQRSRALY
HLRNKEFQECVECFERSLGINPMQLGVWFSLGCAYFALEGYEGAAKAFQRCVGLEPDNSE
AWNNLSTAYIKLRKKEKAFRTLQEALKCNYERWQIWENFIVVCMDVGEFAEAIRAYHRLL
DLKDKYKDVEVLEILVRAVVDDLPDLRGDRASNHRAKLQELFGRVSASCSTDAQIWKQYA
RLYGNGRSDSKEDNEKALHFLSKAHRCETQRSGWEKDTSSFKDVIKGAVDMSTASLHCSR
EKSNPQEALQLLSSARLSLKSLAAKAKQIYTDVTSGELHPELQSEVAHLERLISEIQDLS
VELRSQSE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggagcggagtgtggagatcgaggctgcggtgctgagaggattcctgaccgagagagag
aaatccgagtggggacagagcttcttcaacaccgcagacggaggtccactgctaaagtcg
gtgtttgagggggatttcgaggctgtgttgctcagcggccccgtgttagagatgctctct
ggagagccggagcaggacgagaacattgaattgtatctgcagagatgcatcatcacctac
ctgagcagcaacgatgaagaaaccaggaaggaccgggagttagctatgttagcgttagca
gtttcatgcctgcatctgtttgtccagtctaattggaccggtccaccttttgtcctccac
gtctccgacttcctccctgcggctctgctggacaaacataaagaggctggtgctgtgacg
tctgttctgctctccagtctggtattagatggtgagagtgtatacagtttgctctctaac
cctttcctcctgctggtggctcaagtgctgctggtctcctgtgctgagaagatggacaac
ctgcagctgctcccctggtggacactgaggtatgtggcactgcatcagcaagtcctggag
gaaaaatcaccccaactctacagtctggcaaagagcagtgtggagaaagtgtgtaagctg
gaggagcttctgagcgggaagacacgcagaaccctggccatgatgttccacctggagtgc
agctacacatttctgagctactatgagtaccgcagagctaaggaacatctacagaaagct
caggacctctcaggactccacatcaacatgacaggtgctcttgggaagagaactcgattt
cagcagaattttctcgctcagctcattctggatgttagaaggaaagacgagtccttcatc
cctgacagcgagttttctctaccaccgacccccacaagcctcctgcctaaagaccatcag
ctgaatgatgatacagtactgaaccagataaatctggctgcgccgtcagatcaccaactc
cccgagctcagtgctgaagagcaggcgctcatcctgggggtgtgcaccgacttccagaag
aacaatccggtccacaagctgaacgatgaggagctcctggccttcaccacgtgtgttttg
tctcagccgaagttctgggttgtggaagtgacggcactttgcctgaggagtaaaatggaa
aggtcgagttcacgcagagtggagcgcnncatgatgcaaactcagacgctggttgatttc
ttccttgagaagacgtgtccagtgtccgagcgactgaaaatcttctacagctgccgagct
cctccacactgggatctgcagaggcagttagcaagtttgctaaccgatcttgggctaact
agctctgctttgctgatttatgagaaactggaactctgggaagacgcggtcatctgtctg
gagcgaatgggcaagcatggcaaggcggaggaaattttgagacgagagctggagaagaag
gaaactccgtctctttattgtctcctgggcgatgtgttgaaggatccgcagtattatgac
cgagcctggaagctctcgaaccagcgcagcgctcgagcccagagatcccgagctctttat
cacctccggaataaagagttccaggagtgtgtggagtgtttcgaacggtcgctgggtatc
aatcccatgcagttgggtgtgtggttctcattaggttgtgcgtattttgcactggaaggt
tatgaaggagctgctaaagccttccagagatgtgtgggactggagcctgataactctgag
gcctggaacaacctctctactgcctacatcaaactgaggaagaaagagaaggctttccgc
acgctgcaggaggctctgaagtgtaactatgagcgctggcagatctgggagaacttcatc
gttgtgtgtatggatgtgggcgagtttgctgaagccattcgagcgtatcatcgtctcctg
gacctgaaggacaagtacaaggacgtggaggttctggagattcttgtcagggcggtggtt
gacgatctccctgatctccgtggcgaccgggcgtccaatcacagagcaaagctgcaggag
ctgttcggccgagtctctgccagctgcagcacagatgcccaaatatggaagcagtacgcc
cgtctctatggcaacggccgtagcgacagcaaagaggacaacgagaaggccctacacttt
ctgtctaaagcccatcgctgtgagacgcagagatccggctgggaaaaagacacaagcagc
tttaaagacgtaataaagggagctgtagacatgtccactgcgtctctccactgtagcagg
gagaagtcaaatcctcaggaggctctgcagttgctctcctcagctcggctcagtctgaag
agcttagcggctaaagctaaacaaatctacaccgatgttacgagcggagaacttcacccc
gagctccaaagcgaagtagcacacctggagcggctcatcagcgagatccaggacctcagt
gtcgaactgcgcagccaatcagaatga
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