Silurus meridionalis (southern catfish): 124389831
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Entry
124389831 CDS
T08004
Symbol
qkia
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124389831 (qkia)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124389831 (qkia)
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Gene cluster
GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
KH_12
KH_KRR1_2nd
Ribosomal_L12_N
Motif
Other DBs
NCBI-GeneID:
124389831
NCBI-ProteinID:
XP_046711307
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Position
8:complement(3929564..3994323)
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AA seq
383 aa
AA seq
DB search
MMVGEIEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYND
TVSGLVDKHPLELPEAHGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQARAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDTNIKAPNLAFSLAAAAAAAQGPRLIAAPAGQVL
PPGALRPPTPGGAPIMNLIRPAQMPAMLPNATPTLVPPAPDAGIIYATPYDYPYALAPTS
LLEYPIEHGGVLGKRAWGLGASGFGGHQDGTAAMFYGGSFDMAMPSAAQDLVQGAMATKV
RRHDSRVHPYQRIVTADRAATGN
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggggagatcgaagtgaaggagagaccgaggccgagtcctgactatctcatg
cagttactaaacgagaagaagctcatgaccagcctgccgaacctgtgcggcatcttcaca
caccttgagagactgctggatgaagaaataaacagagtgaggaaggacatgtacaacgac
acagtgagcggtttggtagataagcaccccctggagctccccgaggcgcacggccccatc
gtccacctgcaggagaaactcttcgtcccggttaaggaataccctgactataatttcgta
ggccggattctggggccacgaggtctcacggcgaagcagctggaggcagaaaccggctgc
aagatcatggtcagaggaaagagctccatgagggacaagaagaaggaggagcagaaccga
gggaagccgaactgggagcacctgaacgaggacctgcacgttctcatcacggtggaggac
acacaggcacgagccgagatcaagatgaggagagccgtggaggaggtcaagaagctcctg
gtgccggcggcagaaggagaagacaacttgaaaaaaatgcagttgatggagttggccatc
ctaaacggaacctacagagacaccaatattaaagctccgaaccttgccttctctcttgca
gcggcggccgcagcggctcagggccctcggctgatcgccgcccccgcgggtcaggtactt
cctcctggcgccctgcggcccccgaccccgggcggggctcctatcatgaacctcatccgt
cccgcgcagatgcccgccatgctgcccaacgccaccccaacgctggtgcccccggcgccg
gacgcgggcatcatctacgccacaccctacgactatccgtatgccttggcgccgacctcc
ctcctggagtacccgatcgagcacggaggcgtcctaggtaagcgggcgtgggggcttggt
gcttcaggcttcggcgggcatcaggacggcaccgccgcaatgttttacgggggcagcttt
gacatggccatgccaagcgctgcccaggacttagttcaaggtgcaatggctactaaagtg
cggagacatgactcacgggtccatccttaccaaaggatagtgaccgcagacagagccgcc
accggcaactaa
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