Silurus meridionalis (southern catfish): 124389889
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Entry
124389889 CDS
T08004
Symbol
vsnl1b
Name
(RefSeq) visinin-like protein 1b
KO
K19936
visinin-like protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389889 (vsnl1b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124389889 (vsnl1b)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
124389889 (vsnl1b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
EF-hand domain-containing proteins
Calcium binding proteins
124389889 (vsnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
Dockerin_1
Caleosin
WEF-hand
p25-alpha
IL3
MATalpha_HMGbox
DUF5382
Motif
Other DBs
NCBI-GeneID:
124389889
NCBI-ProteinID:
XP_046711415
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Position
8:17174610..17181695
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AA seq
191 aa
AA seq
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MGKQNSKLTPEVMEDLVKNTEFNEHELKQWYKGFLKDCPSGKLNLDEFQQLYVKFFPYGD
ASKFAQHAFRTFDKNGDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDRIFSKMDKNNDDQISLDEFKEAAKSDPS
IVLLLQCDMQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacagaacagtaagttaacccctgaggtgatggaggacctggtgaaaaacaca
gaatttaatgaacatgagctcaaacagtggtacaaaggtttcctgaaagattgccccagc
ggcaaactgaacctggatgaattccagcaattgtatgttaagttctttccttatggtgat
gcatcaaagtttgctcagcatgccttcagaacctttgataagaatggggatggtactatt
gacttcagagagtttatttgtgccctgtccatcacatcacgaggaagctttgagcagaag
cttaactgggccttcaacatgtatgacctagatggagatggcaaaatcactcgagtggaa
atgctggaaattatagaggctatttacaaaatggttggcactgtaatcatgatgaagatg
aatgaagacggcctgacaccagagcagagggtggatagaatctttagcaagatggataag
aacaacgatgaccaaatcagtctcgatgagtttaaggaagcagcgaagagtgatccatct
attgtactgcttttgcagtgtgacatgcaaaagtga
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