Silurus meridionalis (southern catfish): 124389894
Help
Entry
124389894 CDS
T08004
Symbol
rp1l1a
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein rp1l1a
KO
K19538
retinitis pigmentosa 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124389894 (rp1l1a)
04812 Cytoskeleton proteins [BR:
smeo04812
]
124389894 (rp1l1a)
Cilium and associated proteins [BR:
smeo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124389894 (rp1l1a)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
124389894 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
124389894
NCBI-ProteinID:
XP_046711421
LinkDB
All DBs
Position
8:complement(17393344..17404930)
Genome browser
AA seq
2208 aa
AA seq
DB search
MQSAGFSNSSSQIRNDSLSRLSNVTTATPAKKITFYKSGDNQFSGIRMPIHKRSFKCFGA
LLDDLSQKMPLPFGVRTITTPRGTHAIQSLEQLQDGACYLCSDRHYVKPIDMEVAGKRPA
VWHHSYPLNHRRKPSRPDEPPTEYSAHHYYRQPKKIVLVKNSDPAVRRSIILNRKRARSL
RVFMDEISELMQCHVRKLYTLEGRKIDSTQSLMQCPSVLVCVGREPFKPQLLENLRKNSE
EKLPGIGARSHSSIYSEGHDSKKNVNFGLEAKKSVIHPRSDSSNKSTRFSLSSGKSYANG
SGMTSGQPGCVTKEVVMKDDVEKRVLINKDGSLSVEMKVRFRLVNDETLQWSTEIKKLPT
STNECNPLEETDPHSHCLQNKAVYSEPESNAECGAEEACSSKCHQMDCMESYCQNCCNHS
QGYDIWKNPLHKDNGTCGTRSCSNSAESSDKIMHQKASVDSVYTVSRSSEEYTEHVVETS
CFQQTIEERDTRIKYCSTSRCCSQSEVSTSTTKCNIPIDNCESNTKRICHHNGHTKTDNA
QSDHLYKAKNVKEHLNSSTCNSFIIESFIKKKDDDYDDLSPSISRASQQCSEQYKQFACV
HCYGRQQSQNVQSSFITPKASSCTADALKSKSMYATPELNQGVHADTNSMDCAMSSVSNV
SSMSQCCCSQCREAASSILESDLQGGLKKEGQNSMSDESNVSNKFQSRTNSAWKVTSDNG
AQKACKEKKNSGNRSVLSTNTCSSVKSTVCPCCGGCGRLISTLPSNIQDKPVQEAEEVGE
VKPSCQRSSTGSERSNKCRHCAPKVNLQCQTYLRIFIKIIAEVVVRHACSQSALFDLSDR
STDSEQCIKSNQHVCERSSIAEVISENTKLDDVEGRTESDMTMKSIVNAKTNSDILDKLT
ASETENEIAEEFGNLYIAQENKIKAENVMQDFDIGTKERIPSVMSLKTHSSKDSDKSHKS
SIKDTETASPPVTARSITGTPHVKTNSERSKIELCKSDKVTVKSNACSERDFESVLNPTD
MSTRQETTQKTNDAKCSLQNSSPAASLSPKPPITIKNDNQALSVKLIHSKTSSKSRCDKC
HCSSNRCVEKASNSHSGESKSPALHGIIDEPLSPTATTSISLGLGEEQRSEDFNEQSMGN
ISQIFNEPVCSSEKYTREPYALDAINNSAITETKDRVKTALSTSSMVSDKTKGSNFMPVS
CKTPEVIFGAISESIISTKLKTESKIESQLLQNDDDQKISIISGSSSQNKITFRKDTSHG
AATSKDQCTAKSKERSSSNLEIKEARIPDSNSAASVISSKTSKSGKKLTPKNKYVTKSQV
SQKCIAPDSHGDSVLSPSPDLLKDKDTDAKTGSKRAGSSTSNKNYVLEQLQDTDSNCKCS
RGYKQRTICDTSQNKTENHCKESLMPSCLPNASPTDVINDWLKNIPNDGPMYEMDDEFIK
ELDANPLHISAVEEEGCFRNEFGELSLKPVKVKEYQETGGHESADTGTEDKNTTCNAKLP
HMAFQTLADNSDCSHLSQKVTNRENLKKNCQSSIQVMKVLLSPKLDRCNSLPEVSPTYGK
KLSTSAKGLLDCLANLQMIDPDPKIYDKYSEIISTLQVLWINNPSETMQDNRKMQGHSAE
DEVNLRSSSGVDLSSGSIGSGKGSITGRLEKSESAQGRASEIAEQKVFPQIQRAGENINT
SIVSSDPITPDIAERVRCSPEHENLIEEVQKDEGIKVTDNVFQTDEEIIDLKDIVGISTG
TSENNGNIESVAVADKETNPSECYNSRTLPSDQKGQLTKIISQDPDPVWVLSLLRKLEKQ
FMSHYVNAIAEFKVRWDLNDNETLNLMISELKEEVHKRIQCTINRELQKIQSRAGRTPRP
PASMLSRDSTVQTEQRRRRLKVMQNKLINASKCEEMNNASGTEFSDQRSEEEYCPCETCV
KKKVVSRVAQCAEALSVAPVLKDFDLKKILQTKKHPLVCTPVQSKLDEQKVQKEGYDSSS
LQEKNNFEVVYEDNKVDIITKQIGKDYIFIKGETKDEIITEYGIQACENHEGWKTAKVEP
VDQEDDGQAAKIFYNDTDEADSKTKREKYEVGENLEDKSTVKKDNKVMNRDCDEAEEATD
GNTTADEELSMEEDSSNEVAAEKKETQSSGMEKQQENTLKENKSNDERAEEEVSEGETNK
EGEFGEDEKEERDATEEKAEIPAESEGTAYRTGEETQSAKEGKISRDE
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcaggcttctccaattcaagctcacagattaggaatgattctttgtctcgt
ctctcaaatgtgaccactgccaccccagccaaaaaaataactttctacaagagtggagat
aaccaattcagtggaatcagaatgcccattcataagcgaagcttcaaatgctttggtgcc
ttgctggacgacctttcacaaaaaatgcctttgccatttggtgttcgtacgatcactaca
cccagaggaactcatgctattcagagtctggagcaattacaggatggagcctgctacctg
tgctctgatcgccactatgttaagccaatcgatatggaggttgcagggaaacggcctgct
gtatggcaccacagctacccactaaatcaccggaggaagccgtcccgacctgatgagcca
cctacagaatattctgcccatcactactatagacaaccaaagaagattgtgctggtgaag
aacagtgaccctgcagtgagaaggtccatcattttgaacagaaagagagctcgcagcctt
cgtgtctttatggatgagatctctgaactcatgcagtgccatgtcaggaagctgtacacc
ttggaaggacggaagattgatagtacacagagcttgatgcaatgtcccagtgtgctggta
tgtgtaggcagagagccctttaagccgcaacttctggagaatctgagaaagaactcagaa
gagaagttgcctgggataggtgcaaggtcacactccagcatctacagcgaggggcatgac
agcaagaaaaatgtaaactttggacttgaggcgaagaagagtgtcatccatccaaggtca
gattcaagtaacaaatctacaaggttctccctttcatcaggtaaatcctacgcaaatgga
tcaggcatgacttcagggcagccgggatgtgttacaaaagaagttgtaatgaaagatgat
gttgaaaaaagggttctcattaacaaagatggcagtttgtctgtagaaatgaaagttcgg
ttccgccttgtcaatgatgaaactcttcagtggtccactgaaatcaagaaattgccaaca
tctacaaatgaatgtaatcctttagaggagacagaccctcactctcactgtcttcaaaat
aaagctgtatattctgaaccagagtctaatgctgaatgtggggctgaggaggcatgttca
tcaaaatgtcaccaaatggactgtatggaatcctactgtcaaaattgttgcaaccatagt
caagggtatgacatctggaaaaaccccttacacaaggataatggaacctgtggaaccagg
agctgctctaattctgctgaatcatctgataaaattatgcaccaaaaggcatctgttgac
agtgtgtatacagtttccagatccagtgaagaatatactgaacatgtggtagaaacatct
tgctttcagcagactattgaggagagggatacaagaattaagtattgctcaacaagtcgt
tgttgcagtcagagtgaggtgtcaaccagcaccacaaagtgtaatatacccattgacaat
tgtgagagtaacactaagcgaatatgtcaccataatggtcatacgaaaacagataatgca
caatctgatcatttgtacaaagccaaaaatgtaaaggaacatctgaattcttctacctgc
aattcattcatcatcgagtcattcataaagaaaaaggacgatgattatgatgacctttcc
ccaagcatttcaagagcatctcagcagtgttctgaacagtacaaacaatttgcatgtgta
cactgctatggcagacaacagtcacaaaatgtacaatcatcctttataacacctaaagcc
tcaagctgtactgctgatgcattaaaatccaaaagcatgtatgcaacaccagaactcaac
cagggggttcatgcagacactaatagtatggactgtgccatgtcttcagtttcaaatgtg
tcttcaatgtctcaatgctgctgcagccaatgcagagaagcagcatcaagcatcctggaa
tctgatctgcagggaggtttaaagaaagagggtcagaattcaatgtctgatgagagcaat
gtgtctaataaatttcaatcgagaacaaattctgcatggaaagtgacatcagacaatggt
gctcagaaagcatgcaaagagaaaaaaaatagtggaaatagatctgtcttgtcaacaaac
acatgttcctctgtaaagtccacagtatgcccttgttgtggtggttgtggaagattaata
tcaacactaccatcaaatatacaagataaaccagtccaagaagctgaggaagttggtgaa
gttaagccatcttgtcagagatcatcaacagggtcagagagatctaacaaatgtagacat
tgtgcaccaaaagtgaatctgcaatgtcaaacatacttgagaatatttatcaaaataata
gcagaggtagtggtcaggcatgcttgctcccaaagtgcattgtttgatttatcagatcgt
tccactgattcagaacaatgcattaaatcaaaccagcatgtatgtgagaggtcatctatt
gcagaagtgatttctgaaaatactaaattggatgatgtagaaggcaggactgaaagtgac
atgacaatgaaatccatcgtgaatgcaaagacaaacagtgacatcctagataaattaaca
gcatcagaaacagagaatgaaattgctgaggaatttgggaatttgtatatagcccaggaa
aacaaaataaaagcagagaatgtgatgcaagactttgatattggcactaaagaaagaatc
cccagtgtaatgtcacttaaaacacactcttctaaagattctgacaagtcccacaaatca
agcattaaagacacagaaactgcctcaccaccagtcactgcaagatccattacaggcact
ccacatgtaaaaacaaattcagagaggtcaaaaattgaactgtgcaagagtgacaaagtt
acagtgaaatcaaatgcatgctcagagagagattttgagtcagttttaaatcccactgac
atgtcaaccaggcaggaaacaacacaaaaaacaaatgatgcaaaatgtagtctacagaat
tcctcaccagcagcctccctatcaccaaagccaccaattacaatcaaaaatgataatcaa
gcattaagtgtaaaacttattcattcgaaaacatcttcaaaatcaagatgtgacaaatgt
cactgctcttcgaacagatgtgttgaaaaagcctcaaatagtcactcaggagaatccaaa
tctccagctttacacggcataatagatgaaccattaagtccaacagcaacaacgtctatc
tcccttggacttggtgaagaacagaggtctgaggacttcaatgaacaatcaatgggcaac
atatcacaaatctttaatgagcctgtatgttcatcagagaaatataccagggaaccgtat
gcattagatgctattaacaattctgcaataacagaaaccaaagatagggtcaaaacagct
ttgtctacaagttctatggtgtcagataaaacaaaaggatctaatttcatgccagtttca
tgcaagactcctgaagttatcttcggggctatatctgaaagtatcatatcaaccaaatta
aaaacagaaagcaagatagagagtcaacttttacagaatgatgacgatcaaaaaatttca
atcatatctggaagttctagtcaaaataaaataaccttcagaaaggatacctcccatgga
gctgctacatctaaagatcaatgtactgcaaagagcaaagaaagatcatcttcaaacctg
gaaataaaagaagccaggatacctgactccaacagtgccgcgagtgtgatttcttccaaa
acatccaaatcaggcaagaaacttacacccaagaataaatatgtcactaagtctcaagtc
tcacaaaaatgcatcgcacctgattctcatggtgatagtgttttatctcccagtccagat
ctactaaaggacaaggatactgatgctaaaacaggcagtaaaagagcaggatcaagcaca
tcaaacaaaaactatgtccttgaacagttgcaggatacagacagtaattgtaaatgcagc
aggggctataaacaaagaacaatttgtgatacatcacagaacaaaactgagaatcattgt
aaggaatccctgatgccatcttgtttacctaatgcatcacctacagatgttataaatgac
tggcttaaaaatataccaaatgatggtcctatgtatgaaatggatgatgagttcattaag
gaacttgatgcaaatccccttcacatatctgctgtggaagaagaaggatgttttcgaaat
gaattcggagaactctctttaaagccagtgaaagtgaaagaatatcaagaaacaggtgga
catgaaagtgcagatactggaacagaagataaaaataccacctgtaatgcaaaactgcca
catatggcatttcaaactcttgcagacaacagcgactgtagtcatctcagtcagaaagta
actaacagagagaatttaaaaaagaattgccagtcctcgatacaagtcatgaaggtcctt
ttaagcccaaaactggacagatgcaatagtttgcctgaagtttcgccaacatatgggaaa
aagttaagcacatctgccaaaggtctgctagactgccttgctaatttacaaatgattgac
ccagatccaaaaatatatgacaaatatagtgaaataataagcactctccaggtactttgg
attaacaacccctctgaaactatgcaagacaatcgtaaaatgcagggtcattcagcagag
gatgaggttaacctgaggtcttcatccggggttgatttaagcagtggttccatagggtct
ggcaaaggaagcatcactggtaggcttgaaaaatctgaatcagcacaaggtagagcatca
gaaatagctgaacagaaggtcttcccacagattcaaagagcaggtgaaaacataaatact
tcaattgtctcttcagatcctataactccagacattgctgagagggtgcgatgcagcccg
gaacatgaaaacctaattgaggaagtacaaaaagatgaaggcattaaagtcacagataat
gtctttcagactgatgaagaaattatagatctaaaggatatagtgggaatctcgacaggg
acctctgagaataatggaaatattgaatcagtagctgtagctgataaagaaacaaatcca
tcagaatgttacaactcaagaacactaccatcagatcaaaaaggtcaactgactaagatc
atttcacaagacccagatccagtgtgggttctgagcttgttaaggaaactggaaaagcaa
tttatgtctcactatgtaaatgcaatagcagagttcaaagtacgatgggatttaaatgat
aacgaaacacttaatctaatgatcagtgaactgaaagaagaggttcataaaaggattcag
tgcactataaatcgagagctccagaagatccaaagccgagctggtagaacaccaaggcca
ccagcaagcatgctttctagagattctactgttcaaactgagcaacggcgaagacgtctc
aaagttatgcagaataaacttattaatgcttcaaaatgtgaagaaatgaacaatgcttca
ggtactgagttcagtgaccagcgcagtgaagaggaatattgtccgtgtgagacatgtgta
aaaaagaaggtggtatctcgagttgcccagtgtgctgaagctttgagcgtggctccagtt
cttaaggattttgatcttaagaaaattttgcaaacaaagaaacatccccttgtttgtaca
ccagtccagtccaagctggatgaacaaaaagttcagaaagagggttatgacagcagcagt
ttacaagagaaaaacaattttgaagtggtttatgaggacaacaaagtagatattataaca
aaacagataggcaaggattatatctttattaaaggggagactaaggatgaaattattaca
gagtatggaattcaggcttgtgaaaatcacgaaggatggaagaccgcgaaggtcgaacca
gtggatcaggaagatgatgggcaggctgcaaaaatattttataatgatactgatgaggca
gacagcaaaacaaagagagaaaaatatgaagttggagagaatttggaggacaaaagcaca
gttaagaaggacaataaagtaatgaatagagactgtgacgaggctgaagaggcaacagat
ggaaatacaacagcagatgaagagctatcaatggaagaagattcatctaatgaagtagct
gcagaaaagaaagaaacacaaagcagtggaatggaaaagcaacaagaaaatacattgaag
gaaaacaaatcgaatgatgaaagagctgaagaggaggtgtctgaaggggaaacaaataaa
gagggtgaatttggggaagatgaaaaagaggaaagagatgcgacagaagagaaggcagag
ataccagcagagagtgaaggaacagcatatagaacaggagaggaaacacaatcagccaaa
gaaggcaagatatccagggacgaataa
DBGET
integrated database retrieval system
