Silurus meridionalis (southern catfish): 124389916
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Entry
124389916 CDS
T08004
Symbol
si:ch211-266g18.6
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein si:ch211-266g18.6
KO
K17598
synaptotagmin-like protein
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124389916 (si:ch211-266g18.6)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124389916 (si:ch211-266g18.6)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124389916 (si:ch211-266g18.6)
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
124389916 (si:ch211-266g18.6)
Small GTPases and associated proteins
Rab associated proteins
124389916 (si:ch211-266g18.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
124389916
NCBI-ProteinID:
XP_046711462
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Position
8:complement(3413969..3425669)
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AA seq
1252 aa
AA seq
DB search
MKASRDATIFIDLSFLSPEEEAVIQKVLLRDEDLKKLEMGRVRKLKECVPDPKQLKELSG
EWFEDLKSKRHGRQPHVSAVVRSSMRWKKSSGQRPNPFLKILPEEKAGEKNETHPEHFTD
PRLIHPALSVQQDNEDEAIVLEVIEAGNQSGAKLQDPKLLVESPKLEKELKTKEINKEIL
DPRRSALKEDWGVETRPKQTTKDFEIRSFSDAQETSNWEIRQLDESDQPQSNVVLISSKQ
RTEIGFKDKQNDPKPGVLMNSGFGFEEAIQSPIPKRKFGEIRNITNKRTTPTQTEELVID
VNIKNNPDVLEDLKTSPVSNVNAPGYVHVDPKSLETEKRGKERVVEEIIVSDFKQKSTEK
IIVDIDVDKNPDFLKGPVHNASKSAQMDPVQNGKERVMEEFIVSDSKQKSPTRLKELIVD
FDVEKNPDILVGPDYNVNTPNILKLNQSLDPEQKGKERDVEEIIVADFKQRSSKRTEEIN
VKKDPGLLVGPVYNINAPKSPNLDPDQKGKERICEEIVVADFKQRSPKRSNEQIVDFKVE
KNPDILKTPVNNVNTPKIVKLNQNLDPKQKEKERAVKEIIVTDFKRRSPTWTEEMNVDID
VKKDPDLLVGPVYNINAPKSANLDPDQKGKVFGEIVVADFKRRSPTRTEEINVEKEREFL
QDPVYTINVPKSTNSDPILKGTEQVVEEIIVADFKRRSPTTSKELIVDSDVGQNPDILEV
SVKSRNLERHVNWDQNGKEKAIEEILVDNFKGRSPTRTEELIIDVNVEAKPDIFEDIKNG
PAPKSEVESESAKKVVEEIGEVEPEGSSRDQEEDEGGISDSEILASVYARATRPKMGVSK
IQFARDPVQKTADVIPTIVIVPSESEEPSEMERVKKETPGPEVLVEVTKHVTDTWEDESV
DSDGDSSSVSSQDSDISGKRGQLSASTLSVTERTASLLSVYSDAGDFRNVAVRGSVEFAI
MYSPLGELVIMVEQCQDLAIANLGKQRTDPYVKTYLYPDKRSKRKTSIKKRTVNPVYVES
LRYKVKREELHGKILNLSVWHNDSRGRNAFLGQVEIILKDWDWKHETLTWYNLQPKNADN
QESQECRGILFISLKYISPEATGGSRVSRPTGEIHIWLREAKNLRRLKAQGVDSFVKCYM
LPDTSKXSRQKTRVVKKTQDPVYNHTMVYDGFRVGEVSEACCELTVWDNNKLSNQFLGGV
RLSLGTGLSYGKKVDWMDSESEEVEIWKKMMANPNSWVEGGLPLRSSMTPRH
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtctcgagatgccaccatattcatagacctgagctttctttctcctgaggag
gaagccgttatccagaaagtcctgcttagagatgaggatctgaaaaagctcgagatggga
cgtgtaaggaagctgaaagagtgtgttccagacccgaagcagctgaaggagttatcagga
gaatggtttgaggatcttaagtcaaagcggcatggccgccagccacacgtctcggccgta
gtccgctcctccatgagatggaagaaatcatcaggccaaagaccaaaccccttcctaaag
attttgcctgaggagaaagctggagaaaagaatgagactcacccagaacatttcactgac
ccccgattgattcacccagctctcagtgtacagcaagacaacgaggatgaagcgatcgtt
ttggaagttatcgaagcaggaaatcaatcaggagcaaaactccaagacccaaaacttctt
gttgagtccccaaaactagaaaaggagttgaagactaaagaaatcaacaaagagatatta
gatcctagaagatcagcactgaaagaagactggggtgtggagaccagaccaaagcagaca
acaaaagatttcgagatacgatctttcagcgatgcccaggaaacttcgaattgggaaata
cgtcaacttgatgagtccgatcaaccccaatcaaatgttgtcttaataagctcaaaacaa
agaacagaaataggatttaaagataagcagaatgacccgaaacctggagtgctgatgaat
tctggatttggatttgaagaagcaatccagtctccgataccaaagagaaaatttggggaa
atcagaaacatcaccaacaagcgaacaactccaacacagacggaagagttggtcatagat
gtgaatataaaaaacaatccagatgttcttgaggatctaaaaacaagtccagttagcaat
gtaaatgcacccgggtatgttcatgtggatccaaagagtttggaaacagaaaagagagga
aaggaaagagttgttgaggaaatcatagtctctgacttcaaacagaaatctacagagaaa
ataatcgttgatatagatgtggacaagaatccagattttcttaaaggtccagttcataat
gcatcaaaatctgcccaaatggatccagtacagaatggaaaggaaagagttatggaagaa
ttcatagtgagtgactctaaacaaaaatctccaacaagactgaaggaactgattgttgat
ttcgatgtggaaaagaatccagatattcttgtaggcccagattataatgtgaacacacca
aatattctcaaattgaaccaaagtttggatccagaacaaaaaggaaaggaaagagatgtt
gaggaaattatagtcgctgactttaaacaaagatcttcaaaaaggacagaggaaattaat
gtgaaaaaggatccaggtcttcttgtaggcccagtttataatataaatgcaccaaaatct
cccaatttggatccagatcagaaaggaaaagaacgaatttgtgaggaaattgtagtcgct
gactttaaacaaagatctcccaaaagatcgaatgaacagattgttgatttcaaagtggaa
aagaatccagatatcctgaaaactccagttaataatgtaaacacaccaaaaattgtcaaa
ttgaaccagaatttggatccaaaacagaaagaaaaggaaagagctgttaaggaaatcatt
gtcactgactttaaacgaagatctccaacatggacagaggaaatgaatgttgatatagat
gtgaaaaaggatccagatcttcttgtaggcccagtttataatataaatgcaccaaaatct
gccaatttggatccagatcagaaaggaaaagtttttggggaaattgtagttgctgacttt
aaacgaagatctccaacaaggacagaggaaataaatgtggaaaaagagcgagagtttctt
caagacccagtttatactataaatgtaccaaaatctaccaattcggatccaattctgaaa
ggaacagaacaagttgttgaagaaatcatagtcgctgactttaaacgaagatctccaaca
acatcgaaagaactaattgttgattctgatgtgggacagaatccagatattcttgaagta
tcagttaaaagtagaaacctagaaagacatgtaaattgggaccaaaatggaaaggaaaaa
gctatagaagaaatcctagtcgacaactttaagggaagatctccaaccaggacggaggaa
ctgatcattgatgtcaatgtggaagcaaaaccggacatctttgaggatattaagaacgga
cctgctccaaagtctgaagtggagtctgaaagtgctaaaaaagtggtggaagaaatcgga
gaagtggaaccagaaggtagttctagagaccaggaggaggatgaaggtgggatctctgac
agcgaaattctggctagcgtgtacgcacgtgccactaggcccaaaatgggtgtgtcgaag
atccagttcgcacgagatccagttcaaaagactgcagacgtgattccgactatagtaatc
gtgccgtctgaatctgaggagccgagcgaaatggagcgagtgaagaaggaaactcctggc
cctgaagtgcttgtcgaggtcacaaaacatgtcacggatacctgggaggatgaaagtgtg
gactcggatggggacagcagctcagtttccagccaggattcagatatatctggaaaaagg
ggccagctttctgctagtaccctttcagtcacagagcgcactgccagtttgctcagtgtc
tacagcgatgctggcgacttcaggaacgtggcggtgcgtggatcggtggagttcgcgatc
atgtacagtccactcggagagctcgtcattatggtggagcaatgtcaggatctggccatc
gcaaacctgggcaaacaacgcacagacccatatgtgaagacatacctctacccagacaag
aggagcaaaaggaaaacttccatcaagaaacgtacagtcaatccagtctatgtggaatct
ttgaggtacaaagtaaaacgtgaagaattgcatggaaaaattctgaatttgtctgtatgg
cacaatgactcccgaggtagaaatgcctttttagggcaggttgaaataattctgaaggac
tgggactggaaacatgaaacacttacatggtacaacctccaaccaaagaatgcagataat
caggaatcgcaggaatgccgtggcattttattcatctcattgaaatacatatctccagaa
gctacaggtggttccagagtcagccggcctacaggagagattcatatctggcttcgtgag
gcgaaaaatctacgtcgtctgaaagcccaaggagtcgactcctttgtgaagtgctacatg
ttaccagacacgagtaaanagagtcgtcagaagacccgtgtggtgaagaaaactcaggac
cctgtgtacaaccacaccatggtgtatgatggcttcagagtgggcgaagtgagtgaggcc
tgctgtgaactcactgtgtgggacaacaacaaactgtccaatcagttcctaggaggagtg
cgtctcagcctcggcacaggcttgagctacggaaagaaagtcgactggatggattcggag
agtgaggaagtggaaatctggaaaaaaatgatggctaatccgaacagctgggtcgaggga
gggcttccgttaaggtcttcaatgacacccaggcattga
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