Silurus meridionalis (southern catfish): 124389928
Help
Entry
124389928 CDS
T08004
Symbol
arid4a
Name
(RefSeq) AT-rich interactive domain-containing protein 4A isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124389928 (arid4a)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124389928 (arid4a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Helix-turn-helix
ARID
124389928 (arid4a)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124389928 (arid4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
124389928
NCBI-ProteinID:
XP_046711488
LinkDB
All DBs
Position
8:complement(16622538..16643542)
Genome browser
AA seq
1373 aa
AA seq
DB search
MWPPRLEQPIGFRETQPWLNSLLFRLCFAAQASGERTYRSIYRNQAGLPQIAITMKVADE
PAYLTVGTDVSAKYRGAFCEAKIKTVKRMVKVKVVLKGDSTSQVVQDDQVKGPLRVGSTV
EVKSAEGVFSEAVIIKLTDASWYTVVFDDGDEKTLRRTSLCLKGERHFAESETLDQLPLT
NPEHFGTPVIGKKTNRGRRSSQAVVEDEKESSSSEEEEDDRRRLSDDLLGKVAFIQTGPD
EACWFHALVISPSCNDDLTVKRDQCLVRSFSDSKFHTVARNEIHELCLDTMCKSEHSDKN
GFEEAMLFLQTKQVPGSWKMDMSEILESSSSDEGEGKESEEEEKEPEPEEPDDEPDPEER
DDFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYQHGGCDGIESGSVWKQVYMDL
GIPVLNSAASYNVKTAYKKYLYGFEEYCRSAQIQFRTVHHNEPRPVIQPDVKHVEPENEA
TSEEKDDLSLQTKAEPEASKDKPDGDESDVESEKSRKDICSPRGRRRCTVTPLKMEGKEP
VKQEKVKEEKKHEEVQGGEGSGEEQKEKTEGDHPGKRRSRRLEDSDKDSDEEDREEEDDD
DDDDGDDDDGDSEKYRLRERDERGDEDGDEESEHSVTGTKVKVKYGKGKTQKIYEANIKN
TETDDGEVLYLVHYYGWNVRYDEWVKADRIIWPVDKGGTKRRQKKKMKNKEDGEKEEDRL
PKPAAKRGRPPLKSTPPSTSRSLSKTLNSESRSGSKPSRPSDPSTLPNGEGTPRRHTRKA
SGMYDSDRASNDSGNSSEESDCEDSPEKKPEWAETTDPATARKQEEEEEEKEQKRQEEKK
RVEAAEVESVCPSLPQEKTQLLEETEVEKPEEEVAMSLDSGDKSPKSRAKRARQREPGSE
TPMQLTATTNHAELEGPGIMKPQDDEYISPAEQVPQSAGSDTDSATEDIGPPDRSCVTKR
KAPEHWTPDKKIRLEHKEEPKTLSPEKKSDTERPMNDDHETEEAIAPPVPAVVVPPEDPD
VKMEMPALTKEVQIRVEPLSNLCTMKEDSSAMTDEEMMPQIGPEALVCHEVDLDDPEEKE
KPSGEELLVLREEKTHVPSSVVAQVPPQQPSFHLSSSLTTAAPPQLCSPSSAPSPDESHS
TKSESDATIEADSMAESHEGLCENFDASASSSNSSISLQERDAKDKGQKRLHDCNSGSSS
KKQKRNQKRLGTASAAEKNGAGHSSDSEDLPAMDTSNKLTPVKHSSLAKAHKLSRSPGHA
SPSSKDMEKDKHKEKQSFPSPRTYKWTFQLNELDNMSSTERISFLQDKLQEIRKYYMSLK
SEVASIDRRRKRLKKKEREVSHTTASTSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgccgcggttggagcaaccaatcggatttcgagaaacacaaccttggctcaac
agcttgttatttcgtttatgctttgcagctcaggcgagtggtgagcggacatacaggagt
atttatcgaaaccaagctggactcccccaaatagccatcacaatgaaggtagcagatgag
cctgcctacctgactgtggggacggatgttagtgctaaatacagaggtgccttctgtgag
gcaaaaatcaagactgttaagcggatggtgaaagttaaggtggtgctcaaaggagacagt
acctcacaagttgtgcaagatgaccaggtcaaaggaccgttgagggtgggctccacagta
gaagtcaagagtgcagaaggagtgtttagtgaagctgtcatcattaaacttacagacgcg
agctggtacactgtggtgtttgatgatggggatgagaaaacactcagaagaacatcactg
tgtcttaagggcgaaaggcattttgcagagagcgagactttggaccaactgcctctcact
aacccggagcactttggcactcctgtgattggaaagaagactaatcgagggcggcgctct
tctcaagcagtcgttgaggacgagaaggagtcttcatccagcgaggaggaggaggacgat
agacggcggctcagtgatgatctcttagggaaggtggcattcattcagaccggtccagat
gaagcatgctggttccatgccctggtgatctctccgagctgcaacgatgacttaactgtc
aaaagggaccaatgcttagtgaggtcgttttctgattccaaatttcacactgtggcccgc
aatgaaatccatgaattgtgtttggacaccatgtgcaaatcggagcactccgacaaaaac
ggatttgaggaagcgatgctcttcctccagaccaagcaggtccctggtagctggaagatg
gatatgagtgagatcttagaatcttccagcagtgatgagggtgaaggcaaggaaagtgag
gaagaagagaaggaaccagagccagaagagcctgatgatgagccagacccagaagagagg
gatgacttcctacagcagctttataagttcatggaagacagaggcacaccaattaacaaa
cctcctgtactgggctacaaggacctgaacctcttcaagctcttcaggctggtatatcag
catggtggctgtgatggtattgagagcggatctgtatggaaacaggtctatatggatttg
ggcatccctgttctaaattcagcagcttcatataacgtgaagacagcttataaaaagtac
ctgtatggttttgaagagtactgccgatcagcccagatacagttcaggacagtgcaccat
aatgagcctaggccagtcattcagccagatgtgaagcatgtcgagccggaaaatgaggcc
acgagtgaagaaaaagatgatctgtccctgcaaactaaagctgagcccgaagcaagcaaa
gacaaacctgatggcgatgagtctgatgtcgagagtgagaaaagtcgcaaagacatctgc
tccccaaggggccgacggcgctgtacagtgactccattgaaaatggaagggaaggagcct
gtcaaacaggaaaaggtaaaagaggagaagaagcacgaagaagtgcaaggaggagaaggc
agcggagaggaacagaaggaaaagacagagggagatcatccggggaagcgacgcagtcgg
cgcctagaagattccgacaaagactcggacgaagaggatcgtgaggaagaagacgatgat
gacgatgatgatggtgatgatgatgatggtgacagtgaaaaatacagactcagagaaaga
gatgagaggggggatgaagatggggatgaagagtctgagcactctgttactgggacaaaa
gtcaaggtcaaatacggcaagggaaagacccagaaaatctatgaagctaatattaagaac
acagagacggacgatggagaagtcctctatctggtccattactatggatggaatgtgaga
tatgacgaatgggttaaagcggatcggataatatggcctgtcgataaaggaggaacaaag
agaagacagaaaaagaaaatgaagaataaagaagacggtgagaaggaggaggacagacta
cccaaaccggcggcaaaacgtggccgccctccactgaagtccacccctcccagcacatcc
cgcagtctatccaaaactttaaacagtgagagcagatctggctccaaaccttcccgtccc
tcagatccttccactctacctaatggagagggaactccccgtcggcacaccaggaaagcc
tctgggatgtatgattctgaccgagcatctaatgattcaggaaactcatcagaagagagc
gattgtgaggacagtcctgagaagaagcctgaatgggcagaaacgactgatcctgctaca
gcacgaaagcaggaggaagaggaggaggaaaaggaacagaaaaggcaagaggagaaaaaa
agggtagaggctgctgaggttgagtcggtgtgtcccagcctccctcaggaaaaaacacag
ctgctggaggaaactgaggtggagaaacctgaggaagaagtggctatgtcactagactct
ggtgacaaatctcctaaatcaagagcaaaaagggctcgccagagagaacccgggtcggag
acgccgatgcagctgactgccacaacaaaccacgctgagcttgaggggcctggcattatg
aagcctcaggatgacgagtacatcagccccgcagagcaagtgcctcaatcagctggctca
gacaccgattcagccactgaagacatcggtcctccagacaggagttgcgtaaccaagcgc
aaagctccagagcattggactccggacaaaaagattcgcctcgagcacaaagaggaaccc
aaaactttgtcaccagagaaaaaatcggacactgaaaggccaatgaatgacgatcatgaa
acagaagaagccattgcaccaccagtaccagcagtagtggttcctcctgaagatcctgat
gttaaaatggaaatgcctgctcttaccaaagaagtccagataagagtggaacctctttca
aatttgtgcacaatgaaggaggactcctcagcaatgactgatgaagagatgatgcctcag
ataggtccagaggcactggtatgtcacgaggtagacctcgatgaccctgaagagaaggag
aagccatcgggagaggagctactggtactaagggaggagaagactcatgttcccagctcg
gtagtagctcaggtgccgccccagcagccctcgtttcatctctcttccagcctgacaaca
gcagcaccacctcagctgtgttctccgtcctctgcacccagcccagatgagtctcacagc
accaaaagtgagagtgatgccaccatcgaggcagacagcatggccgagtcgcatgagggg
ctctgtgagaactttgacgccagtgcaagttccagtaactcaagcatttccctgcaagaa
agggatgccaaggacaaaggtcagaagagattgcacgactgcaacagtggctcatcttct
aagaagcagaaacgtaaccaaaaaaggttaggaaccgcttctgctgctgaaaaaaatgga
gcaggtcacagcagtgatagtgaagacctgcctgctatggacacctctaataaactgact
ccagtaaaacactccagcctggccaaggcccataagctctctcgctctcctggccatgca
tcccccagcagcaaagacatggagaaagacaagcacaaagaaaagcagtccttcccctct
ccacgcacatacaaatggactttccagctgaatgagctagacaacatgtcgagcacggag
agaatttctttcctacaagacaaacttcaggaaatccgcaaatactacatgtccttgaaa
tcggaggtggcttccatcgacaggaggcggaaaaggttaaaaaagaaagagagagaagtg
tcccacaccacagcatccacatcctctggctcgtcagacacgggcatgagtccatcctca
gcttcgcccactcagaacactgtagctgtggagtgcaggtga
DBGET
integrated database retrieval system
