Silurus meridionalis (southern catfish): 124390026
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Entry
124390026 CDS
T08004
Symbol
rnf144aa
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124390026 (rnf144aa)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124390026 (rnf144aa)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124390026 (rnf144aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
zf-RING_2
zf-RING_UBOX
Trm112p
Motif
Other DBs
NCBI-GeneID:
124390026
NCBI-ProteinID:
XP_046711658
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All DBs
Position
8:complement(11722859..11753971)
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AA seq
293 aa
AA seq
DB search
MTTARYRPTWDLALDPLVSCKLCLGEFPLEQMTTITQCQCVFCTLCLKQYVELLIKEGLE
TAISCPDSACPKRGHLQENEIECMVASEIMQRYRKLQFEKEVLLDPCRTWCPSSSCQAVC
QLKEADSARPQLVRCGNCTLEFCSACKASWHPGQECQENPPLTAFLPGESSSFFKSDDDD
APIKRCPKCKVYIERDEGCAQMMCKNCKHAFCWYCLESLDDDFLLIHYDKGPCRNKLGHS
RASVIWHRTQVIGIFAGFGLLLLVASPFLLLATPFVLCCKCKCSKGDDDPLPT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcacgctatagacctacctgggacctggcactggacccgctggtgtcttgt
aagctgtgtctaggagagttccccctggagcagatgaccaccatcacacagtgtcagtgt
gtgttctgcactctgtgcctgaagcaatatgtggagcttctcattaaagaaggcctggaa
actgctatcagctgcccggactctgcctgtccaaaacgaggacatttgcaagaaaatgag
attgagtgcatggtggcgtcggagataatgcagagatacaggaaactacagttcgaaaaa
gaggtgcttttggacccgtgccggacgtggtgcccgtcatcatcatgccaagccgtgtgc
cagctgaaggaggcggattctgcccggccgcagctggtacgctgtggtaactgcacgctg
gaattctgttctgcttgcaaggccagctggcacccaggccaggagtgtcaagagaatcca
cccctcactgcctttctgcctggtgagagcagttctttctttaagagtgacgacgatgac
gctcctatcaagcgctgtcccaaatgtaaagtgtacatagagcgagacgaaggttgtgcc
cagatgatgtgtaagaactgcaaacatgctttctgctggtactgcctggagtctctggac
gacgactttctcctgatccattatgataaaggaccctgccgcaacaagctgggccactcc
agagcttcggtgatttggcacagaacacaggtcattggaatctttgctggtttcggcctg
ctcttgctggtagcttctccgttcctgctcttagccacacctttcgtgctgtgctgcaag
tgcaagtgcagcaaaggggacgacgaccccttaccaacctaa
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