Silurus meridionalis (southern catfish): 124390062
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Entry
124390062 CDS
T08004
Symbol
sptb
Name
(RefSeq) spectrin beta chain, erythrocytic isoform X1
KO
K27409
spectrin beta, erythrocytic
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124390062 (sptb)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
124390062 (sptb)
Intermediate filaments
Intermediate filament-binding proteins
124390062 (sptb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
SOS1_NGEF_PH
ABATE
Motif
Other DBs
NCBI-GeneID:
124390062
NCBI-ProteinID:
XP_046711712
LinkDB
All DBs
Position
8:13072150..13098855
Genome browser
AA seq
2476 aa
AA seq
DB search
MMSSGLCCTMPVSQSQLPEVKLSLKTSREVTSIRSSAYSSRKELPIRISTQATRSRSTPP
VSRVQSGENKAAPKTNGHTKHEPKKLPERKSTLRGIPPTQASLTVSASSSSSSSSSFSYT
SRLSRPSPPQKPSSSSSSSSQSMKRTRWLSHSTSNICFNSVLDGRFRQLQDEREAVQKKT
FTKWVNSILARVSCRISDLYLDLRDGKMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKA
LQFLREQRVHLENMGSHDIVDGNHRLILGLIWTIILRFQIQDIVVEVGQVDKTGKQETRS
AKDALLLWCQMKTAGYPNVNITNFTTSWKDGLAFNALIHKHRSDLVDYGNLQRSNPTHNL
QQAFNVAERNLGVTKLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKALAVEGKRVGKVL
DNAIDIEKMIKMYETLSSDLLTWIEQTIIILNNRKLANSLNGVQQQLQAFNSYYTVEKPP
KFQEKGNLEVHLFTIQSRMRANNQKVYTPKEGALVADINRAWARLERAEHERERVLRDEL
IRQEKLEQMVRRFDRKAAMRETWLLENQKLVAQDNFGYDLPAVEAAKKKHDAIETDIAAY
AERVQSLVALSKELESERYHDAKRINARKDNILRLWDYLQELLSARRGRLEKNLTLQRIF
QEMLYIINWMDEMKNRVQSLDFGKHLLEVEDLLQKHALIEADIAVQAERVNTANAAALKF
ANGDSYKPCDPQVIRDRVQHLDLCYQELCALAAQRKARLQQSRRLWNFFWEIDELESWIR
EKEHIFSSLDYGKDLTSVLVLQSKHSAFEDELDARRDHLKQVMAEGEKMVKAKHFGAPKV
QQRMDEVQRQWQQLEELAAFRKQNLQDTQRFFQFQGDADDLKSWLLDAIRQMSTEDIGHE
EYATQRLLKRHRALSDEAVKNGATIDALTKQANSLPSELKNTPDIQRRLEDIRDMYMELL
SLSDLRKKKLEDTLALYTIFSETDACELWMGQKETWLVGLETPEKLEDLEVVQNRLSILT
QEMGNMQTRVDDINKAAKQLEDSRHPRSKEVKDCQTRLNKRWDEFKAMVQYKKHNVDSAL
SLHNYGLECDETGAWIRDKTRVIESTQDLGNDLAAVMTIQRKLYGIERDLAAIQDKLNFL
HGEAQQLVKDHPENAADILARQAELNKAWDLLKQTLKDREDSLGEVSKLQNFLQNLDDFQ
SWLFKTQKATASEEMPTSLPDAEELLGHHNLIKQDMDRHEEDYHSIRDTGAAVTRDQEED
AQYQQLDQRLKGLDKGWDELQKMWDSRKNFLDQGMGFQQFSRDAKQAETILNNQEYTLAH
LDQPDTLDGAEKALKKHEDFVTTMNANEDKILNTIDGGQRLVDSGNLYSTKVKDKMNSIQ
DRYLKNKDKANEVSEKLRDNKDLQHFLQNTQDLTLWINEKMLTAQDTSYDEARNLHSKWQ
KHQAFMAELVSNKDWLNKIDQEGKELMASKPEFEPVVTERLTKLHDLWNKLENTTQEKAR
LLFDAHRSELFEQSLGDLKKWLSNLQQQLQGDVDEEVNDLTSANIYIKKHQMTENQVRDR
ARELEELQQAEQQHTPLTDEQPELEHELQAVHRDFQQLLTPLAQRKGKLEAAKAVYQLYR
DVADEILWLEERLPMAMSQDHGNNLQTVQLLLKKNQTLQKEIEGHQPRVDEVLQRGQGMM
ADAEGSPEAEHMSEEIKRLEEVWARLQDEMAKRRARLHASNDAQQYYNDADEAEAWIGEQ
ELYMIADDKAKDEQSAVILLKRHLILKQAVDDYADSIQKLADRAQKMLAEEHPEGEAIIR
RQGQVDKQYAGLKELAEDRRRYLDHTYHHFLLSREVEDLEQWIAERDVVASLQEMGQDLD
HVTILRDKFREFARETGTVGQERVDTVNHTIDELIEAGHSESSTLAEWKDGINESWADLL
ELIDTRTQLLTSSYDLFKYFYDGKELVVQIEEKQNELPEDLGEDFSKAESFHRMHAAFER
DISSLGKQVQQFQDTAARLHAQYAGIQADAIKATEKEVVDAWKGLLAACAGRRKQLEETA
NKFRFFTMVRDLMAWMESIIQQIETQEKPRDVSSVELLMKYHQGIRAEIETRGPKFNDCV
ELGRTLLAQKHRDSDEIKEKLMQLIEKRKEMMLKWDDRWDWLRLLLEVCQFSRDASVAEA
WLIAQEPYVASKDLGGSVDEVEKLLKRHEAFEKSTATWEERFSALERLTTLELLEIRKRQ
LEIQQYIQEEEKDSRREDTGFAEESSRLDTIEEQSLSGMVAAEPGSGHGESTAGDSAVPI
MSDIQESGSMELEPSTSSQATREAEHAATLPAMPTQSQPVLMEGTLTRKHEMEGPNKKAT
NRSWNSIYFVLKSGLLSAYKDAKSFSHSVTYHGEEPLSLSNAVCEVLTNYKKKKHVFKLR
LGDGSEYLFQCRDEEEVNIWIQALERAAQYVTEEPVATSSESHAQTLPLPSTSTASEVSS
GKKEKEKRFSLFTKKK
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagcggtctgtgttgcacaatgcctgtaagtcagagccagctgccagaggtg
aagctcagcctgaagaccagcagggaggtcacttcaatccgctccagtgcctattcctca
agaaaagaacttcctatccgcatcagcactcaagccaccagaagcaggagcacgccgcct
gtgtccagagttcaaagtggcgagaacaaggcagcgcccaagactaacggacacaccaag
catgaacccaagaaactgcctgagaggaagagcactttacggggcattccaccaacccaa
gcctccttgactgtctctgcctcctcctcctcctcctcctcttcctcattctcctacact
tcgcgactttcccgaccctcacccccgcagaaaccttcttcctcctcatcatcttcttcg
cagagtatgaaacgcacccgctggctaagtcacagcacctccaacatctgcttcaactcc
gttttagatggcaggttcagacagcttcaagatgagcgagaagctgtgcaaaagaagact
ttcacaaaatgggtgaactccatcttggctcgagtcagttgtcgtatctcagatctctat
ctagatctgcgggatgggaagatgctcatcaaactacttgaggttctgtctggtgaaagg
ctgcccaagcccactaaaggtcgaatgaggattcactgcttggagaatgtagacaaggcc
ctgcagtttctaagggagcagagggttcatttggagaacatggggtcacatgatattgta
gatggaaatcatcgtcttatcctggggctcatttggactatcattcttcgcttccagatt
caagacattgtagtagaggtaggacaagtagacaagacggggaagcaggagacacggtcc
gctaaagacgccttgttgctttggtgtcaaatgaagactgctgggtatcccaatgtaaat
atcaccaacttcaccacaagctggaaggatggcttagctttcaatgcccttatacataaa
cacaggtcagatctggttgactacggcaacttgcagagatccaatccaactcacaatctt
cagcaagcttttaatgtagctgagagaaatcttggagtcaccaagctcctggacccagag
gatgtgtttaccgagaacccagatgagaagtccattatcacttatgttgttgctttttat
cactacttctccaagatgaaagctctggcagttgaaggcaagcgggttgggaaggtgctg
gataatgccatcgacatagagaagatgattaagatgtatgagacgctttcctcagacctg
ttaacatggattgagcagaccatcattatcctgaacaaccgcaaacttgcaaattctctc
aatggagttcagcaacaattacaagcctttaactcatactatactgtggagaagcctcca
aaattccaggagaagggaaatctggaggtacaccttttcacaatccagagcaggatgagg
gccaacaatcagaaggtttacacacctaaagagggtgcactggtggcagacatcaacagg
gcatgggcgcgcttggagcgggcggaacatgagcgagagcgggtgcttagagatgagctt
attaggcaagaaaagcttgaacaaatggtgcgtcgctttgacaggaaagctgccatgaga
gagacctggttacttgaaaaccagaaattagtagcacaggataattttggatatgaccta
ccagcagtagaggcagcaaagaaaaagcatgatgccattgagacagacattgcagcgtat
gcggagcgtgtacaatcccttgtggccttgtctaaagagctggaatcagagaggtaccat
gatgctaaacgaattaatgcaaggaaagacaatatcctgaggctctgggactacctccag
gagctcctgagcgctcgcaggggccgtctggagaagaatctcaccttgcaaagaatcttc
caggaaatgctttacatcattaactggatggacgagatgaagaatcgtgtccagtctctt
gattttggaaagcacttgttggaggtggaggaccttctacaaaagcatgctttaattgag
gcagatattgctgtgcaagcagagagagtgaacactgctaatgcagctgctctcaaattt
gcaaatggagacagctacaaaccatgtgacccccaagtgattcgagacagagtacagcat
ttagacttatgttatcaggagctgtgtgcacttgcagcacaacgcaaagcccgtttgcag
caatctcgtcgtctctggaactttttctgggagatagatgaacttgagagctggatccgt
gagaaagaacacatcttttcctcgctcgactatggcaaggatctgactagtgtgctggtg
ctgcagagtaaacacagtgcttttgaagatgagctagatgctcggcgtgatcacctgaaa
caggtgatggccgaaggtgagaagatggtgaaagccaaacattttggtgccccaaaggtg
cagcaacgcatggatgaagtacagaggcaatggcagcaactggaggagctggctgcgttc
cgcaaacagaacctccaggacacccagcgtttcttccaattccagggtgatgctgatgat
cttaagtcctggttgttggatgccatacggcagatgagcactgaagatatcgggcacgag
gagtacgccacacaaaggttgctcaagaggcatcgtgccctgagtgatgaggcagttaag
aatggagcaactattgatgctttgaccaaacaggctaattcactgcccagcgagcttaaa
aacacacctgacatacaacgacgtctggaggacattagagatatgtacatggagctcttg
tctctctcagacctgcgaaagaagaaactagaggacactttggcactgtacaccattttc
agtgaaacagatgcctgtgagctctggatgggccagaaagagacatggcttgttgggtta
gagacaccagagaagttggaagatttggaggttgttcagaataggttaagtatcctcacc
caagaaatgggcaacatgcaaacacgggtggatgacatcaacaaagcagccaagcaacta
gaggacagcaggcacccacgatccaaagaagtgaaggattgtcagactcgtctcaataag
aggtgggatgagtttaaggctatggttcaatataagaagcataatgtggattcagccctc
agccttcacaactatgggcttgagtgtgatgaaactggggcatggatcagggacaagaca
cgagtcattgagtccacgcaggaccttggaaatgatcttgctgctgtcatgactattcaa
aggaaactttatggtattgaaagagacctggctgctattcaggataagctgaacttcctg
catggtgaggcccaacaacttgtcaaggaccatcctgaaaatgcagctgacattttggcc
cgacaagcagagctaaacaaggcttgggacctgttgaaacaaacgctaaaggatagagag
gactcgcttggtgaagtaagcaagttacaaaacttccttcagaacctggatgactttcag
tcctggcttttcaagacacagaaggccaccgcatctgaagagatgcctacaagtcttcca
gatgctgaggaactcctaggtcatcacaatttaattaaacaagatatggataggcatgaa
gaggactatcacagcattagagacactggagcagctgtcactcgtgaccaagaggaagat
gcccaataccaacagctggatcaaaggctgaaaggcctagataaaggatgggatgagctg
caaaaaatgtgggacagccgaaagaactttttggaccaaggcatgggttttcaacaattt
tcaagagatgcaaaacaagctgaaactatcttgaacaaccaggagtacactctggctcac
ctggaccagcctgacacacttgatggggcagagaaggctttgaagaagcatgaggacttt
gtcaccactatgaatgcaaatgaggacaaaatattaaacacaatagatggtggtcaaagg
ctggttgacagtggaaacctttactcaaccaaagtaaaggacaaaatgaactcaattcaa
gacagatatttgaagaacaaagacaaagccaatgaggtatctgagaagctcagagacaat
aaagacctgcaacactttcttcagaacactcaggatcttactctgtggataaatgagaag
atgctgactgctcaggacacatcgtacgatgaggctcgcaacctgcacagcaaatggcag
aagcaccaggccttcatggcagaactggtttcaaataaggattggctcaacaaaattgac
caggaaggtaaagagctgatggcctccaaaccagagtttgaacccgttgtgactgaacgt
ctgacaaaacttcatgatctgtggaacaagctggaaaacaccacacaggaaaaggctcgg
cttctgtttgatgcccaccgctccgaactgtttgaacagagcctgggtgacttgaagaag
tggttgtctaatttacagcagcagctccagggtgatgttgatgaggaggttaacgatctt
acaagtgccaatatctatatcaagaagcatcagatgactgagaatcaggtgcgagatcga
gctcgggagctagaagagctacagcaagctgagcagcagcatactccgctaactgatgag
cagcccgaactggaacatgagctgcaggctgtccatagagacttccagcaactccttaca
cctttggctcaacgcaagggcaaacttgaggcagctaaagccgtgtaccagctctacaga
gatgtggcagacgaaatactatggcttgaagagagattgcctatggccatgtcacaggat
catgggaacaatctacagacagtccagcttctcctgaaaaagaatcagaccctccagaag
gagattgaaggtcaccagccacgtgtggatgaggttctgcagcggggtcaaggtatgatg
gcagatgcagaaggaagcccagaggcagaacatatgtccgaggaaattaagaggttggag
gaggtgtgggcaaggctgcaagatgagatggcaaaacgccgagctcgactacatgcctct
aatgatgcccagcagtactacaatgatgcagatgaggcagaagcatggattggtgaacag
gaactctacatgattgctgatgataaagcaaaggacgagcagagtgctgtgattttgcta
aagcggcacttgattctgaagcaggctgttgatgactatgcagattctatccagaagctt
gctgaccgtgctcagaagatgcttgctgaggagcatcctgaaggggaggccataattcgg
aggcagggtcaggtagacaaacagtacgcaggcctgaaggagctggctgaggaccgcagg
agatatcttgatcatacttatcatcacttccttctgagccgggaggtggaggacctggag
cagtggattgctgagcgtgatgtggtggcttctttacaggagatgggacaggacctggac
catgtcacgattctgagggataagttcagggagtttgcaagggagacggggactgtggga
caggagcgggtcgacactgtgaatcacactattgatgagctgattgaagccggtcatagc
gaatcatctactctggctgaatggaaggatggcattaacgagagttgggcagatctcttg
gaactcattgacacccgcacacagcttctcacttcttcttacgacttgtttaaatacttt
tatgatggcaaagagttggtggtccagatcgaggagaaacagaatgagcttccggaagat
ttgggagaggatttcagcaaggcagagtctttccatcgcatgcatgctgcatttgaaaga
gatatcagctcccttggaaagcaggtacagcagttccaggacactgcagctcgtctacat
gcgcagtatgctggaatccaagcagatgccatcaaggcaacagaaaaagaggtggtagat
gcctggaagggtcttctggctgcctgcgcgggaagacggaaacagcttgaggagacggca
aacaagttccgttttttcaccatggttagggacctaatggcctggatggaaagcatcatc
cagcaaatcgaaactcaggagaaacccagagatgtttcatcagtggagttgctaatgaag
tatcaccaagggatccgtgcagagattgagactcgtggaccaaagtttaatgattgtgtg
gagctagggcggaccttactagcacagaaacacagggactcagatgagattaaagagaag
ttgatgcagctgattgagaagagaaaggaaatgatgcttaaatgggatgacagatgggac
tggctgagactgttgttagaggtgtgccagttctcccgggatgcatctgtagcagaagcc
tggctgatagctcaggaaccatatgtggccagtaaagacttggggggatctgtggatgag
gtagagaagttgcttaaaaggcatgaagcctttgagaaatccactgccacatgggaggag
cgattctctgcattggagcgcctcacaacacttgagctgcttgaaatcagaaagcggcag
ctggaaattcagcagtacatacaggaagaggaaaaggacagcaggagagaagacacagga
ttcgctgaagagtcctcacgtttggacacaatcgaggagcagtcactttctggcatggtg
gcagcagaacccggctcaggccatggagagagcactgcaggagattcagcggtgcccatc
atgtcagatattcaggaaagtggctctatggagctggaaccctcaacatcttcccaggct
accagagaagcagagcatgctgccacccttcccgccatgcccacacagtctcagccagtt
ctgatggaaggaaccctcacacgtaaacatgagatggagggacctaataaaaaagcaacc
aacagatcctggaacagcatctacttcgttttgaaatctggcctgctttcagcctacaag
gatgcaaagagttttagccatagtgttacgtaccatggcgaagaaccactgtcactcagc
aatgctgtttgcgaggttctgaccaattacaagaaaaagaagcatgtatttaaactgcga
cttggagatggaagtgaatacctgttccagtgtagagatgaggaggaagtgaatatctgg
attcaggccctagagcgggcagcacagtatgtgacagaggagccagtagcaacatcttca
gaatctcatgcccaaaccttgccccttccatcaacctccactgcctcagaagtttcctct
ggcaagaaggaaaaggagaagaggttttcgttattcactaaaaagaagtga
DBGET
integrated database retrieval system
