Silurus meridionalis (southern catfish): 124390072
Help
Entry
124390072 CDS
T08004
Symbol
lrrc8c
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C isoform X1
KO
K22038
volume-regulated anion channel
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124390072 (lrrc8c)
Ion channels [BR:
smeo04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
124390072 (lrrc8c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
124390072
NCBI-ProteinID:
XP_046711725
LinkDB
All DBs
Position
1:complement(22383583..22393321)
Genome browser
AA seq
827 aa
AA seq
DB search
MLNLGVISQRRGTRSNLEDLCFLRKMIPVTEFRQFTEQQPAFRVLKPWWDVFAEYLSVVM
LMIGVFGCTLQVMQDKIICLPQRVYAPNQTVPSINHTELTRDPTNSTLPPVSSVPISNEM
RGLKTNLDLQQYSFVNQLCYEKALHWYAKYFPYLVLIHTIVFMVCSNFWFKFPGSSSKIE
HFISILGKCFDSPWTTRALSEVSGESPEDKDHKKNSASRSNLNTSTVEGNLEKTQSLRSI
PERIVVDKPTASALDKKEGEQAKALFEKVKKFRLHVEEGDLLYLMYVRQTVIKVIKFVLI
VAYNSLLVSKVRITVQCDADVENMTGYRKFLCNHTMAHLFSKLCYCYLCFVIVYGLTCLY
TSYWLFYRSLKEYSFEYVRQETGIDDIPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVS
ENKLKQLNLNHEWTVEKLRQKLQTNASDRLELQLFMLAGLPDTVFEVTELQSLKLEIINN
VTIPAAIAQLEDLQELSLHQCNLKIHTGALSYLKENLKVLRVKFDDNRELPLWLYSLRNL
EELHLVGSLSPDASKNITLDSLRDLKSLKTLTLKSNLTKIPQSVVDVSSHLQHLYVHSDG
TKLVMLNNLKKMVHLIELELVHCDLERIPHAVFSLTHLQELDLKENNLRSVEEIISFQHL
RKLTCLKLWHNAITQIPEHIKKLGSLERLYFSHNKIEVLPSHLFLCNKLRHLDLSHNDIS
FIPPEVGVLQSLQYFSVSSNKIENLPDELFFCKKLKTLKLGRNMLSVLSPKISYLASLTY
LELKGNHFEVLPAELGCCQALKRSGLLVEDTLFDTLPSEIRDNMRAE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaccttggtgtaatctcacagagaagaggaactcgaagtaatctggaagatttg
tgttttctaaggaaaatgattccggtcacagaattccgacagttcacggaacagcagccg
gcatttcgagtccttaagccatggtgggatgtgtttgccgaatatttgtctgtggtcatg
ctcatgatcggtgtgtttgggtgcacactgcaggtaatgcaagacaaaatcatatgtctt
ccgcaaagggtgtatgctccaaaccaaacggtgccttcaataaaccacacggagctcacg
agggatccgactaattcaactcttccacctgtctcctcagtgcctatatcaaacgagatg
aggggactcaaaaccaacctggatctccaacaatacagctttgttaaccaactgtgctat
gaaaaggctttgcattggtatgccaagtattttccttacctggtgctcatacatactatt
gtattcatggtgtgcagtaatttctggttcaagttccctggctcaagctcaaaaattgag
cacttcatctccatattgggcaaatgttttgattctccatggactacgagggctctgtct
gaggtgtcaggagagagcccggaggacaaagaccacaaaaagaacagtgcaagtagatca
aaccttaatacctccactgtggagggtaatctggagaaaacccagtcgctgaggtctatt
cctgaaagaattgtagtggacaaaccgacagcaagtgcacttgacaagaaggaaggagag
caagccaaagcattgtttgagaaggtgaaaaagttcagacttcacgtagaggaaggggat
ttgttgtatctcatgtatgttcgacagactgttatcaaagtcatcaagtttgttctaatt
gttgcctacaacagtcttctagtgtcaaaggttagaattacagttcaatgcgatgcagat
gtggagaatatgactggctacaggaaatttctgtgcaatcacactatggctcatctcttc
tccaagctctgctactgctatttgtgttttgtaatcgtctatggattaacgtgcctctat
acatcgtactggcttttctaccgttcactgaaagagtactcttttgaatatgtgcgtcag
gagactggaattgacgacatcccagatgtgaaaaatgattttgcctttatgttgcacatg
attgaccaatacgatcctctgtattccaaaaggtttgcagtgtttttatctgaggtgagt
gaaaacaagctgaaacaactcaatctgaaccacgagtggaccgtagaaaaacttcggcaa
aagttacagaccaatgccagtgacagactggagcttcaactattcatgcttgcagggctt
ccagatacagtctttgaggtcaccgagctgcagtctctaaaattggaaatcattaataat
gtcacaattcctgcagccattgctcaactggaagatcttcaggagctttctctgcaccag
tgcaaccttaaaatccacacaggggccctatcataccttaaggaaaaccttaaggttctg
cgtgtcaagtttgatgataaccgtgagcttcctctgtggctctacagtcttcgaaatttg
gaggaactccatctagttggatctctgagtccagatgcatcaaagaacataaccctggac
tctttgcgtgatcttaaatccctcaaaactttgacactcaaaagcaacctaacaaagatc
ccccagtcagtggtggatgtgtccagccatctgcagcatctgtatgtgcacagtgatggc
accaagctggtcatgctaaacaacctgaaaaaaatggtgcatcttatagagcttgagctg
gtccactgtgaccttgaacgcattccgcatgccgtcttcagtctgacccacctgcaggag
ctggacctcaaagaaaacaacttgcgctctgttgaggagatcatcagcttccagcacctc
agaaaactcacatgcctaaagctgtggcacaatgcaatcactcaaatccctgagcatatc
aaaaagctgggcagtctagagcgtctgtatttcagccacaataaaattgaggtattgcca
tcacacctgtttctgtgcaacaagctgcgccatcttgacctttcccataatgacatcagc
tttattcctccagaagtgggggttctccaaagtcttcagtacttctctgtcagttccaac
aaaattgagaatctcccagatgaactcttcttttgcaagaagctgaagaccctcaagctc
gggaggaacatgctttctgtgctctcaccaaagatttcctacctagcttcactgacttat
ttggagttaaagggcaatcattttgaagttttgcctgctgaacttggctgctgtcaggcc
ttgaagcgcagtggccttttggtagaagacaccctgtttgacacactgccttcagaaatc
agggataatatgagagccgagtga
DBGET
integrated database retrieval system
