Silurus meridionalis (southern catfish): 124390075
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Entry
124390075 CDS
T08004
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00280
Valine, leucine and isoleucine degradation
smeo00650
Butanoate metabolism
smeo01100
Metabolic pathways
smeo04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
124390075 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
124390075 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124390075 (hmgcl)
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
124390075 (hmgcl)
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GFIT
Motif
Pfam:
HMGL-like
DUF732
Motif
Other DBs
NCBI-GeneID:
124390075
NCBI-ProteinID:
XP_046711727
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Position
8:complement(26552555..26562942)
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AA seq
334 aa
AA seq
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MAAVMMRMVHTSFRLGSGRFWFSAPGAKSISLHASKPLPERVKIVEVGPRDGLQNEKTIV
PAEVKIRLIDMLSDAGLPVIEATSFVSPKWVPQMADQEEVMRGINRKSGVNYPVLTPNLK
GYRAAVKAGAKEVAIFGAASELFSKKNINCSVEESLQRFEEVISVAKQEGVPVRGYVSCV
LGCPYEGTVSPLKVADVAKRLYVMGCYEISLGDTIGVGTPGGMSEMLEAVMKEVPVDALA
VHCHDTYGQALANILVALQNGVSVVDSSVSGLGGCPYAQGASGNVATEDVVYMLHGLGIH
TGVDLQKLMDAGSFICRSLDRRTSSKVAQASCKL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgtgatgatgaggatggtgcacacttcgttccggctcggttcgggtcgcttc
tggttctctgcgcctggagctaaatcaattagtttgcatgcttcgaaacctcttccagaa
cgggtgaagatcgtggaagttggacccagagatggactgcagaatgagaagaccatcgtt
ccagccgaggtgaagatccgtctgatcgacatgctctcagacgcgggacttcctgtcatc
gaggccacgagttttgtctcgccgaaatgggtgccacagatggctgatcaggaggaagtg
atgcgtggcatcaacaggaagtctggagtgaattatccagtgctgactcctaacctgaag
ggctacagagctgctgtgaaggctggagcgaaggaggtggcgatattcggtgccgcctcg
gagctcttcagcaagaagaacatcaactgttcggtggaggagagtctgcagcgcttcgag
gaagtgatctcggtggccaaacaggaaggcgtccctgtacgagggtacgtgtcatgtgtc
ctgggatgtccttacgaaggcacagtctcgcctctgaaggtagccgatgttgcgaagcgc
ctgtacgtgatgggatgttatgaaatctcgctgggcgacacgatcggagtggggacgccg
ggcggcatgtccgagatgctggaggcggtgatgaaggaggtgccggtcgacgccctggcg
gttcactgccacgacacgtacggccaggcgctcgctaacatcctggtcgctctgcagaac
ggtgttagcgtcgtggactcgtcagtctcggggttgggcggctgcccctatgctcagggg
gcttcaggaaacgtggccacagaggatgtggtgtacatgttgcatggactcggcatccac
acgggtgtagacctgcagaagctgatggacgccggatcgttcatctgccgctctctcgac
agaagaaccagttccaaagtcgctcaagcgtcgtgtaaactgtga
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