Silurus meridionalis (southern catfish): 124390085
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Entry
124390085 CDS
T08004
Symbol
capn3a
Name
(RefSeq) calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124390085 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smeo01002
]
124390085 (capn3a)
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
124390085 (capn3a)
Peptidases and inhibitors [BR:
smeo01002
]
Cysteine peptidases
Family C2: calpain family
124390085 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Ndufs5
Motif
Other DBs
NCBI-GeneID:
124390085
NCBI-ProteinID:
XP_046711745
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All DBs
Position
8:14329449..14340799
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AA seq
713 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSVNKPLQFSGQDFNSLKLDCLQKKVLFEDKTFPATV
ESLGYKELGHKSNKVKNIVWKRPKDICDNPQFIIGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRVVPQDQSFSDNYAGIFHFQFWRYGDWVDVVVDDRIPTLNDQLVFTKSAERNE
FWSVLLEKAYAKLHGSYEALKGGNTAEGMEDFTGGVTEFYEIKEAPKELYKIMKKALERG
SLMGCSIDSLVPARLETRTVTGLVKGHAYSVTAVDECKQSIQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWATISKEEKEKLHQQSAEDGEFWMSYNDFMKNYTKIEICNLTPDALDDD
KLHKWTVSVNEGCWVKGCSAGGCRNYSDTFWTNPQYRLRLFEEDDETDNSEAACSFVVAL
MQKNRRKDRKLGANLFTIGFSIYEVPKEMHGNKQHMQKEFFLLNSSKARSKAYINLREVT
QRFKLSPGEYVIVPSTYEPHQEGEFLLRVFSEKKNVSEEIENRIEADHPAPAPASAGDET
EEDQQFRTIFEKITGDEMEISASELRNVLNSVLAHHKDMGKEGFSLESCRSMIAFMDMDG
TGRLHLQEFRQLWNKIKQWQEIFKHYEAEQTGFISSYEMRNAINDAGFRLNNPLYNIITM
RYANKNMNIDFDSFVCCLVRLETMFRAFQAFDQDGDGTIRLSVLEWLQLTLYA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccctacacaccctcaggctttttttgtgaccggctaatccgggaaagagagagaagg
gatggagaaggatctgtaaacaaacctcttcaattcagtggtcaggactttaacagtctg
aaattggattgtcttcagaaaaaggtgctatttgaggataagacctttccagccactgtg
gagtccctgggttacaaggaactgggccacaagtccaacaaggtcaagaacattgtctgg
aaaagacccaaggatatctgtgataatccacagttcattattggaggtgccagcagaacg
gacatctgtcagggagacttgggagactgctggctgcttgctgccattgcttgtcttact
ctgaatgataagctgctgtatcgggttgttcctcaagatcagagtttctctgacaattat
gcaggaatatttcattttcagttctggcgttatggtgactgggtcgatgttgtggttgat
gatcgcatccctaccctcaatgaccagcttgtgtttactaagtctgctgagaggaatgag
ttctggagtgttctacttgagaaagcatatgccaaactgcacggttcttacgaggctctg
aaaggtggcaacactgccgaggggatggaagacttcaccggaggagttaccgagttctat
gaaataaaagaggcacccaaggaactttacaaaatcatgaaaaaggccttggagagagga
tccctcatgggttgttctattgattccttggtcccagcccgccttgagactcgcactgtg
actgggctagtgaaaggtcatgcctattctgtaactgctgtggatgagtgtaaacagagc
atacagaaagaatctaaagtccgtctggtgcgtctccgtaatccatggggccaagtggag
tggaacggaccttggagtgataattcaaaggagtgggctaccatttctaaggaagagaaa
gaaaaattgcatcaacagagtgcagaagatggagagttctggatgtcctataatgatttc
atgaagaactacaccaagatagaaatttgtaacctgacccctgatgctttggatgatgat
aagctccacaagtggacagtgtctgtgaatgagggctgctgggtaaaaggctgctctgct
ggaggctgcaggaattattcagacaccttttggacaaacccacaatatcgccttcgcctc
tttgaggaggatgatgaaacggacaacagtgaggccgcctgctcctttgttgtggctctt
atgcagaaaaatagaagaaaagatcgcaaacttggtgctaatttatttactattggattt
tccatctatgaggtgccaaaggagatgcatggtaacaagcagcacatgcagaaggaattc
ttcctgctgaactcgtccaaggctcgcagcaaagcctacattaacttgcgggaggtgact
caacgcttcaagctgagccctggggaatatgtcatagtgccttccacctatgagccccat
caggaaggcgagtttctcctccgtgtcttctctgagaagaagaatgtgtctgaggaaata
gagaacaggatcgaagctgaccatccagctccggctccagcctcagcaggggatgagact
gaggaggaccagcagttccgcaccatttttgagaagatcactggggatgaaatggagatc
tcagccagtgagctgagaaatgtcctgaacagcgtgttggctcatcacaaagacatggga
aaagagggttttagtctagagagctgccgtagtatgatagccttcatggatatggatgga
acaggcagacttcatctgcaggagtttagacagttgtggaataagattaagcagtggcag
gaaatctttaagcattatgaagctgagcagactggttttatcagcagctatgagatgagg
aatgccatcaatgatgcagggttccgtctcaacaacccgctgtacaacattatcacaatg
cgttacgccaacaagaacatgaacatcgactttgacagcttcgtctgctgtcttgtgcgt
ttggagacgatgttcagagctttccaggcctttgatcaggatggagacggcaccatccgg
ctgtccgtactggagtggctccagttgaccctgtatgcctaa
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