Silurus meridionalis (southern catfish): 124390133
Help
Entry
124390133 CDS
T08004
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00562
Inositol phosphate metabolism
smeo01100
Metabolic pathways
smeo04020
Calcium signaling pathway
smeo04070
Phosphatidylinositol signaling system
smeo04081
Hormone signaling
smeo04082
Neuroactive ligand signaling
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04270
Vascular smooth muscle contraction
smeo04310
Wnt signaling pathway
smeo04371
Apelin signaling pathway
smeo04540
Gap junction
smeo04621
NOD-like receptor signaling pathway
smeo04912
GnRH signaling pathway
smeo04916
Melanogenesis
Module
smeo_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
124390133
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124390133
04371 Apelin signaling pathway
124390133
04020 Calcium signaling pathway
124390133
04070 Phosphatidylinositol signaling system
124390133
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124390133
04081 Hormone signaling
124390133
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
124390133
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124390133
09152 Endocrine system
04912 GnRH signaling pathway
124390133
04916 Melanogenesis
124390133
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
124390133
04270 Vascular smooth muscle contraction
124390133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390133
Enzymes [BR:
smeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
124390133
Membrane trafficking [BR:
smeo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
124390133
Endocytosis
Macropinocytosis
Phospholipase C
124390133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
EF-hand_like
C2
PLC-beta_C
Motif
Other DBs
NCBI-GeneID:
124390133
NCBI-ProteinID:
XP_046711826
LinkDB
All DBs
Position
8:17934571..17969709
Genome browser
AA seq
1190 aa
AA seq
DB search
MAKAYEFNWQRLVPHIMQEGEYFDRFDEDPFVFEPHCLFRVDAFAFFITWKSEGKEGQVL
ECSLINSIRNTNVPKDPKILSAFETIGKSESDLEGRIICVCSGTDLVNLSFMYIVAPTIS
IAKQWTDSLRLLIHNTRANNVCPMTCLKKHWMKLSSLTNVSGNIPVRSITRTFASGKTEK
VIFQALKDLGLPSGKNDEIEPDVFTFDKFYSLTQKICPRTDLEALFKNLCGDKSDYLNIE
QLVSFLNENQRDPCLNEILFPFYDTKRARQIIETYETDENLRIKGVMSCDGFCRYLMSDE
NAPVFLDRLEHYQEMDHPLSHYFISSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCVELD
CWDGKGEDQEPIITHGKAMCTDVLFKDVIQAIKETAFVSSEYPVILSFENHCSRHQQYKL
ARYCEDIFGDILLKQPLEDFPMVPGQPLPSPNDLKGKILIKNRRLKPEVEKKQLEHFRKH
MESGETNTVMSEDENEEDPASAELVDEAHPERICGSLVINQTNNSEGNMLGARKAGETNV
ADEQALIQSYTYVAATTNIHPYLSSVINYAQAVKFLGFEEAEEKNIYYNMSSFNESVGLG
YLRTNAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVALNFQTPDLAMQLNQ
GKFEYNGSCGYLLKPDFMRRPDRTFDPFSETPVDGVIAATCSVQVISGQFLSDKKIGTYV
EVDMYGLPTDTIRKEFRTRMVLNNGLNPVYNEEPFVFRKVILPDLAVLRIAVYDDNNKLI
GQRILPLDGLQAGYRHISLRNEGNNPLSLPTIFCNIILKTYVPDGFGAIVDALSDPKKFL
SICEKRTDQMRAMGIETWEIAEVPNDSPKKSKRGKTNHLKAMSPQKVSERHPTSSGQNAS
VPPRIVSSEPLNMPQVTIDDLKQMKAYMKLEKKQLKEVNALERKHAEAYTALQRSHYTQT
EKMATQHEKEKRALEKQLEKSSKRVSECNWETRGELEERIKIVTTDHKTKVKNIIAAQAE
ELAEMTKTHNAENQDLSDQHMLQQCELLRKLMLITQEKQTQQLANLHERQSKEMRANQAK
SSMENSKAISQDKSIKNKAERERRVRELNSNNTRKFLIERKKLSLSQSKELDQLQTVQHE
QLDQLDKYHAKLLKSHLSTSPCHGQNYTAHAQEEPRSEKGPSSALNSRNT
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcttatgaatttaactggcagaggctggtgcctcatattatgcaggagggg
gaatattttgatcgattcgatgaggatccatttgtctttgagccacactgtctttttaga
gtggatgcctttgcatttttcatcacatggaaaagtgaaggaaaggaaggccaggttctg
gagtgctctttaatcaacagtatacggaacacaaatgtgcctaaggatccaaagattttg
tcagctttcgagaccatcgggaagtctgagagtgacttagagggcagaatcatctgcgta
tgcagtggcacagatttggttaatctaagcttcatgtacatagtggcacccaccattagc
attgcaaagcaatggactgacagcttgcgcttgctgattcataacactcgtgcaaacaat
gtgtgcccgatgacctgtctcaagaaacactggatgaagctgtcatctttgaccaatgtg
agtggaaatatcccagtgagaagcataacaagaacttttgcttctggcaaaactgaaaag
gttatattccaggcacttaaagaccttggtctgcctagtggaaagaatgatgaaattgag
cctgatgttttcacctttgacaagttttactctctcactcagaagatttgccccagaact
gaccttgaagcactgttcaaaaacctctgtggagataagagtgattatttaaacatagag
caattagtcagctttttaaatgaaaaccaacgagacccttgtcttaacgagatactcttt
ccattttatgacaccaaacgtgcacggcaaatcatagaaacctatgagactgacgagaat
cttagaataaaaggagtgatgtcatgtgatggcttttgccggtatctgatgtctgatgag
aatgctccagtgtttcttgatcgactggagcattatcaggagatggaccacccactttca
cactacttcattagctcctctcacaacacatacctgactggcaggcagtttggtggaaag
tcttctgtggaaatgtaccggcaagtcctgctctctggctgcaggtgtgtggagctggac
tgctgggatggaaaaggagaggatcaagagccgattatcactcatggcaaggcaatgtgt
acagatgtgcttttcaaggacgtcattcaggccatcaaagaaactgcatttgtgtcttcc
gaataccctgtgattctttcatttgagaaccactgctcgaggcatcaacaatataagttg
gcccgatactgtgaggatatttttggagatatactcctcaagcaacccttagaagacttc
ccaatggtgcctggacagcctttgccttcaccgaatgatcttaaaggaaaaatccttatt
aagaacagaaggttaaagcctgaagttgaaaagaagcaactggagcacttcaggaagcat
atggaatctggagagacaaacactgttatgtcagaggatgagaatgaggaagatcctgcc
tctgcagagcttgtggatgaggctcatcctgaacggatatgtggaagtcttgtcattaac
cagacaaataatagtgaaggaaatatgcttggggctagaaaggctggtgaaacaaatgtg
gctgatgagcaagcattgatccaatcatacacttacgttgcagcaaccacaaatattcac
ccctacctctctagtgttataaactatgctcaggctgtgaaattcctaggttttgaggaa
gctgaagagaagaacatctactacaacatgtcttccttcaatgagtcagtaggactggga
tacttacggaccaacgctattgaatttgtcaattacaacaagcgccagatgagtcggatt
taccccaaaggaggcagagtggactctagtaattatatgcctcagatattttggaacgcc
gggtgccagatggttgcactgaacttccagaccccagatttggcaatgcagttgaaccaa
ggaaagtttgagtacaatgggtcatgtggttatttgctgaaaccagatttcatgcgtcgg
ccagatcgcacatttgaccctttctctgaaacccctgtggatggagtgatagcagccact
tgcagtgtccaggtaatttcaggccagtttttgtctgacaaaaagattggcacatatgtg
gaggtggatatgtatggcctgcccacagataccattcgcaaggagtttcgcacgaggatg
gtgctgaacaatggcctaaaccctgtatacaatgaagaaccattcgtttttagaaaggta
atccttccggacctcgcagtgctcagaatagcggtgtatgatgacaacaataagctgatt
ggtcagaggattctccccctggacggtctacaggctggctatagacacatctccctaaga
aatgagggcaacaatcctctttccttacccaccatcttctgcaacattatcctcaaaaca
tacgtacctgatggatttggagccattgtggatgccctgtctgacccgaaaaagttctta
tccatttgtgaaaagagaacagaccaaatgagagctatgggcattgagacgtgggagata
gctgaggtgccaaatgacagcccaaaaaagtctaagagaggaaagacaaatcatctaaag
gccatgtcacctcagaaagtttctgagcgacaccctacatcatcaggacagaatgcgagc
gttcccccaagaatagtgtcctctgaacctttaaacatgcctcaagttaccattgatgac
ctgaaacagatgaaggcatatatgaaactagaaaagaaacagctgaaggaggtgaatgcg
ttggagagaaagcatgcagaggcatacactgccttgcagagatctcattatactcagacg
gaaaagatggcgacacaacatgaaaaagaaaagagggcactggaaaagcaattagaaaaa
agtagcaagagagtcagtgaatgtaactgggaaaccagaggggaactggaggagaggata
aagattgtgaccacagaccacaaaacaaaggtgaagaacattattgctgctcaagcagag
gaactagctgagatgacgaaaacccacaatgctgagaaccaggacctcagtgaccagcat
atgctacagcagtgtgaactgctcagaaagttgatgcttataacacaggaaaagcagaca
cagcagcttgcgaacctccatgagcgacagagtaaggagatgagagctaaccaagcaaag
tcatcaatggagaacagtaaagctatcagtcaagacaaaagcatcaaaaacaaggctgag
agagaacggagagttcgagaactgaacagcaacaacacaagaaaatttcttatagaaaga
aaaaagctctccttgagccagtccaaagaacttgatcagctccagacagtccagcatgaa
cagctcgatcagctggataaatatcatgctaagctcttgaagtctcacctttcaacatct
ccgtgccacggccaaaattacacagcacatgcacaagaagaaccgagaagtgaaaaaggt
cccagtagtgccctaaactcccgaaacacatga
DBGET
integrated database retrieval system
