Silurus meridionalis (southern catfish): 124390139
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Entry
124390139 CDS
T08004
Symbol
colec11
Name
(RefSeq) collectin-11 isoform X1
KO
K10066
collectin sub-family member 11
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124390139 (colec11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390139 (colec11)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
smeo04091
]
124390139 (colec11)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Phagocytosis
Opsonins
124390139 (colec11)
Lectins [BR:
smeo04091
]
C-Type lectins
Collectins
124390139 (colec11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
124390139
NCBI-ProteinID:
XP_046711840
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All DBs
Position
8:complement(12249500..12252685)
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AA seq
277 aa
AA seq
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MSGESLGTCVLVILLGLMVLESAYGQHITEEPCSVQILVPGLKGEIGEKGEKGAPGRPGR
VGPPGEMGPPGLKGQKGIMGRYGKMGPSGFKGLKGDMGDPGPKGENGDPGLPCECGPLRK
MIGEMDNHVAQLTSELKFIKKALPSPAAVAGIKEMDSKVYLLVKEEKRYRDAEIYCQGRG
GHLAMPKDSGANRAIAGYITEAGLSRVYIGINDLEHEGHFIYVDRSPMSTFTKWREGEPN
NAYEDEDCVELVSSGEWVDVACSLTMYFVCEFDKDPI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagaaagcttggggacatgtgtgctggttattctgctgggattaatggtacta
gagtcagcttatggtcagcacataacagaggagccctgctctgttcaaatcctcgttcca
ggacttaaaggggaaataggggagaagggggagaaaggggcgcctgggagacctggcaga
gtggggccacctggagagatgggacctcctggacttaaaggacaaaaaggtatcatggga
cgctatggaaaaatgggcccctctggatttaaaggtttaaaaggtgatatgggagatcca
ggtcccaaaggtgaaaatggagacccaggactcccctgtgagtgcggtcccttgcgaaag
atgattggtgaaatggataatcacgtggcgcagttaaccagtgaactgaagttcattaaa
aaagcactgccctcccctgcagctgttgctggcattaaagagatggacagtaaagtgtac
ctgctggtgaaggaggagaagcgttacagagatgctgagatctactgccaaggcagaggt
ggacacctggctatgcctaaagattccggtgcaaacagagccattgctggctacataaca
gaagctggccttagcagagtgtacatcggcatcaatgacctagagcacgagggacatttt
atttacgtggaccgctcgcctatgagcaccttcactaaatggagggaaggagagcccaat
aacgcttatgaagacgaggattgtgtggagctagtctcttcgggggagtgggtagatgtg
gcctgctctttaaccatgtacttcgtgtgcgagtttgacaaagacccaatctga
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