Silurus meridionalis (southern catfish): 124390150
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Entry
124390150 CDS
T08004
Symbol
sec16b
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390150 (sec16b)
Membrane trafficking [BR:
smeo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124390150 (sec16b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
124390150
NCBI-ProteinID:
XP_046711863
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Position
1:complement(21716156..21739565)
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AA seq
953 aa
AA seq
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MDPRGQNWKEQWPQNQRSEHRVRDEQYRSHHTGKHGNYPSPDARDIDRRWYARDPRYMYY
MSGPPAEFSTAYSSQTPDRARSHSRQGYDYPPQNYWTYRNDSSYYDHGYYRGHYGYPAAS
DTSSWPVQGWRTEGNQEWSGATYTPQHGYELRRDSGQYDGGVSLRESMDTRNEAGEVSEP
GGLASSKTSGLSSSTYELSQYINGDEQSNAPPPAHSAEAESKSVVPLKFCVPHVALSFGP
AGQLVRVTPVLPTHGEPAQVELHSMEVILSDTREQNDMRGFPGPLTREDLHKVDVINFSL
QMADACLKDETSCNDSSVSLLWQLLVLLCRQNGRIVGSDIAELLLRGSRSVGTFDGDGEQ
SDVGSLIDLNESPKSESESYNSLDLLTGNPLSNEENSKENLQNYTKLLLAGRKKEALESA
MRSGLWGHALFLASKMDSRAYNTVLSRFTGSLSPSDPLQTLFQFLSGRIPAVAMSYSKEK
WGDWRHHVAVMLSNKNGESAMHFKSIVNLGDTLASRGLLHAAHICYLTAHTSFGWYSNKA
ERLVLLGSSHSASFAEFCHDSAIRCTEVFEYCQRLGNPSFIIPSFLVYKFLYACRLLDCG
LFSQAFHYCELVAKALLTIQEPHIILLQEVIKMVDRLKHSEAQVSETGADPDWLSLLRQH
LQDLLMGKSGNNGLDLSAAEATALAQKENRECADFYQDDLSKTEMIHTSLEEESHNGSGN
VHYNQSHPHSSYPSEEQSYSGYFPTGQSYTSYPSEEQSYIPETQTCAPEEQNLPQIYAPV
PIYSQQNLFPSELPAVHEVQDGVNHSDITYRQTVSSLDSRSHNITDGDFSTDKNMMGVPT
NDTALDRADQGMTTPPCPPPSKANTKEATILKSEKEPKSGWFSGWFKSKPNEIPKDQYEQ
SKPAAMESPPIPTFPPLPKISSTMLPSQNQTASVNPYSRKAGQKPGAAVGQAP
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcgagggcagaactggaaagaacagtggccacagaaccagcgctcagaacac
agagttagagatgagcagtacaggtctcatcacacaggaaaacatggcaattacccttct
ccagatgcaagagacatcgacagacgatggtatgctcgagatccacgttatatgtactac
atgagtggtcctcctgcagagtttagcactgcatacagcagccaaacacccgaccgagct
agatcccactccaggcagggatatgattatcctccccagaattactggacctacagaaat
gactccagctattatgatcatggctactacagaggacattatggatacccagcagcctca
gataccagttcatggccggtgcaaggatggaggacagaagggaatcaggagtggtcagga
gccacatacacacctcagcatgggtatgagctcagaagagacagtggacagtatgatggt
ggagtttctcttagagaaagcatggataccaggaatgaagctggagaggtgtctgaacct
ggaggcctagccagctctaaaacatctggcctatcgtctagcacctacgaactcagtcag
tacatcaatggagatgagcagagcaatgctccacctccagctcactcagcagaggctgaa
tccaagtcagtggttccattgaagttctgtgttcctcatgtggctttaagctttgggcct
gcaggacagctggtgagagtcactccagtgttgccaactcatggagaacctgctcaggtg
gagctccacagcatggaggttatactgagtgacacacgtgagcaaaatgatatgagaggt
tttcctggaccactgacaagggaggatctgcataaggtggacgtcattaacttttccctg
cagatggctgatgcttgtctgaaggatgaaacctcgtgcaacgattcctcggtctccctc
ctgtggcaactactggtactgctatgtagacagaatgggagaatcgtgggttctgatatt
gcagaactcctgcttcgaggaagccgctctgtaggaacatttgatggagatggtgagcag
tcagatgtaggcagcctcatagatctgaatgaatctccaaaatcagagtcggagagctac
aactctttagatctcctaactggaaacccactcagcaatgaagagaattctaaagaaaac
ctccagaactacaccaaactcctgctggctggaagaaaaaaggaagcactggaatcagca
atgcggagtggattatggggacatgctctgtttctggccagcaagatggacagtagggcc
tacaacactgtactgagcaggtttacagggagcctatctcctagtgatccactccaaacc
ctttttcaattcctttctgggaggattccagctgttgccatgtcctatagtaaggaaaaa
tggggtgattggaggcatcatgttgctgttatgttatccaacaaaaacggagaatctgct
atgcacttcaagtccatcgtcaacttgggtgacaccttagcttccagaggcctgctgcat
gcagctcacatctgctacctcacggctcacacatcctttggttggtactcaaacaaagca
gagcgtctggtgctactgggcagcagtcacagtgcttcctttgctgaattctgccatgac
tcagccattcgctgcactgaagtgtttgaatactgccagagactaggaaacccgtctttc
atcatcccttcttttctggtgtacaagttcctgtatgcatgtcgattgctagactgcggt
ctgttctcacaggctttccattactgtgagcttgtagccaaagctctgctcacaatacaa
gagccacacatcatactgctacaggaggttattaagatggtggacagacttaaacactct
gaagcacaggtcagtgagacaggtgctgatccagactggctgtctctcctacgtcagcac
ctacaggacctgctgatggggaaatcgggcaataatggattggatctctcagctgctgaa
gctactgctttggcccaaaaagagaacagagagtgtgcagatttttaccaagatgacctt
tccaaaactgagatgatccacacctctcttgaagaggaaagtcataatggttcaggaaat
gtgcattacaatcagtcccatcctcattcctcctacccatcagaagagcagtcttactct
ggttattttccaacaggacagtcctacacatcctacccctcagaggaacaatcttacatc
ccagaaacccaaacgtgtgctccagaagagcagaatcttcctcaaatctatgctccagtt
cccatctattctcagcagaatctgttcccttcggaactcccagcagttcatgaagttcag
gatggtgtaaatcattctgacataacataccgtcagactgtttccagtctggattcaagg
agccacaacattacagatggtgatttctccactgataaaaacatgatgggtgttcctaca
aatgatactgcacttgatagagctgatcagggcatgacaactcctccttgtcctcctcct
tctaaggctaatacgaaagaagccactattctaaaatcagaaaaggaaccaaagtcaggg
tggttcagtggatggttcaagtcaaagcctaatgaaattcccaaagatcagtatgaacaa
tcaaaacctgctgccatggagtcacccccaattcctacctttcctcctctaccaaagata
tcttccaccatgctgccttcacagaaccaaactgctagcgtcaatccctattctaggaaa
gctggtcaaaagccaggtgcagctgtgggccaggctccctaa
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