Silurus meridionalis (southern catfish): 124390220
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Entry
124390220 CDS
T08004
Symbol
ift27
Name
(RefSeq) intraflagellar transport protein 27 homolog
KO
K07934
intraflagellar transport protein 27
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
smeo03037
]
124390220 (ift27)
04031 GTP-binding proteins [BR:
smeo04031
]
124390220 (ift27)
Cilium and associated proteins [BR:
smeo03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124390220 (ift27)
GTP-binding proteins [BR:
smeo04031
]
Small (monomeric) G-proteins
Rho Family
Others
124390220 (ift27)
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Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
ATP_bind_1
RsgA_GTPase
Arf
TniB
GTP_EFTU
MMR_HSR1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
124390220
NCBI-ProteinID:
XP_046711992
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All DBs
Position
1:complement(4553889..4563269)
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AA seq
193 aa
AA seq
DB search
MVKLRARCILVGDAAVGKSALSQMFCSDGSHFQKNYTMTAGVELLVKSMSIPETNDSVEL
YIFDTAGRETFAETCEKMWGQPSVVCVVFEISSLDSFNSCSRWLERVRAHCNGLQLPGVL
VGNKSDLASRREVETAVAQEWAREQGLQYHETSAKEMENCDAPFLSLAQAFHAMYQDRRQ
IIQRLSWDPTDHQ
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaattacgagccaggtgtattcttgtcggagatgcagcggtaggaaagagcgcc
ttgtctcagatgttctgcagcgatggctcccacttccagaagaactacaccatgaccgct
ggtgtggagctgctggtgaagtcaatgagcattccagagactaacgacagtgtggagctt
tatatatttgacactgcaggacgggagacatttgcggagacatgtgagaaaatgtggggg
cagccatcagtggtgtgtgtggtgttcgagatcagcagcctggactcattcaacagttgc
agccgctggctagagagagtccgagctcactgcaacggactgcagttaccaggtgtgtta
gtggggaataaatcggacctggcatcgaggagagaggtggagacagccgtggcgcaggag
tgggcacgggaacaaggtcttcagtaccacgagacctccgctaaagaaatggagaactgt
gacgccccctttttgagcttagcccaagcttttcatgctatgtatcaggatcgaaggcag
ataatccagaggctcagttgggaccccacagaccaccaataa
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