KEGG   Silurus meridionalis (southern catfish): 124390228
Entry
124390228         CDS       T08004                                 
Symbol
bicc1a
Name
(RefSeq) protein bicaudal C homolog 1-A isoform X1
  KO
K18756  protein bicaudal C
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124390228 (bicc1a)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124390228 (bicc1a)
SSDB
Motif
Pfam: KH_BICC1 KH_BICC1_1st KH_1 KH_GLD-3_1st KH_Vigilin SAM_1 SAM_2 KH-I_KHDC4-BBP KH_Mug60-KHD4 KH_NusA_2nd
Other DBs
NCBI-GeneID: 124390228
NCBI-ProteinID: XP_046712005
LinkDB
Position
8:complement(24035254..24094123)
AA seq 1039 aa
MTKVAPGISKRKKSSTNALECSTVPSYARSESEIPGAQCVQRRFPCDMAALRVPLSACSQ
HSDQGSNSERSADSPLAASESDSSGHVSPPNPEWTEDRFRVDRKRLETLLLASEGRVIGG
EDFFQKIMDETSTQIAWPSKLKIGAKSKKDPHIKVSGRRDDVREAKGRILAVLDTKSKRV
TLKMDVSHTEHSHVIGKGGNNIKRVMEETGCHIHFPDSNRNSQGEKSNQVSIAGQPAGVE
TARAKIRELMSVVLMFECGGFVESLDLSAPVIQHIAQSCGVTISCKPPSHIYCNTAVIRG
NQSNIAAVKRGAALLLDHLAGSMSGSVTVSTQLDIAPQHHLSLLGRNAANLKHISQRTGA
HIHFPDPSTLLPTHAHTRRSSVYIQGSIDAVCDARQQLMGCLPLVLMFDIKEEAEIEPQC
VTTLMEQLDVFISIKPKPKQPSKSVIVKSVERNAVNMYEARRLLLALESACGSSTSSPVS
SSFPLRTNSVPVNAHTSSPSSSSSSSILLNPDGLDALVSAGLGLSTLGLLTSPDVPTRSS
SSDSNPVLNGHVPVPNGHNDVVGTLQNSSCNHTLAQLQGSSLWTNTHTTSANTAGFSSVL
MLQSASQGSLSGLLLSGVHSYSQNYTHTPSLSHTHTPSPPPGLAPIHKPVSTEQLKAHMP
SMYRGISSVSMTESMLGPAHCDSAQEVNGHSQSEALSSKSSSDEGSDTFVEVGMPRSPSH
SANGIELKQMLSSCRVSSGKRQTVELLQGTKNLRSDCLLSDAETDAVADKRAPGSERAAE
RNRLAPHIHAYDYEKKKLLATKAMLKKPVVTEVRTPTNTWSGLGFSKSMPAESIKQLRRP
SHTAYKPSGNTTCQGTSLSCKGTRETPGNNNPESWHTRNGNRVINGNGAATHAFSSAIGA
PERSKSRSAMDQYLSSSNYMECISFMGGNTASSLSSSLKGTDLPELFSTLGLGKYTDVFQ
QQEIDLQTFVTLTDPDLKELGIATFGARRKMLLAISELNKSRRELFESSNIRPSFLEGGA
NSRLARHFNADMASVSGRW
NT seq 3120 nt   +upstreamnt  +downstreamnt
atgaccaaagtagctcctgggatcagcaaaagaaagaaaagctccactaacgcactggaa
tgttccaccgttccgtcgtatgcaagaagtgagagtgagattcccggagctcagtgtgtc
cagcggcggttcccgtgcgatatggccgcgctgcgcgtccccctgagcgcctgctctcag
cactctgaccagggttccaacagcgagcggagcgctgactctcctctggccgcctcggag
agcgactcgagcggccacgtgtctccgcccaacccggagtggaccgaggaccggttccgt
gtggaccgaaagagattagaaaccctgttattggccagtgaagggcgagttatcggcgga
gaggattttttccagaagatcatggatgaaacaagcactcagatcgcctggccttccaaa
ctgaagatcggagccaaatccaaaaaagaccctcacattaaggtcagtggaaggagagat
gatgtgagagaagctaaaggaaggatcctggccgttttagacacaaagagtaaacgtgtg
acgctgaagatggacgtgtcgcacacggagcattcacacgtgatcgggaagggagggaac
aacatcaagcgtgtgatggaggaaacgggctgccacatccacttccccgactccaacagg
aatagccagggagagaagagtaaccaggtgtctatagcagggcagccagcgggagtggaa
acagccagggccaaaatccgggagttgatgtcagtggtgttgatgtttgagtgtggggga
tttgtcgagtctctggacctcagcgctccagtcatccagcacatcgctcagtcctgcggc
gtcactatttcatgcaagccgccgtcccatatctactgcaatactgctgtcatccgtggt
aaccaaagcaacattgcagcagtcaagcgtggtgcagctttgctgttggatcacctggcc
ggctccatgtccggctcagtcacggtcagcactcagctggacatcgctcctcagcaccac
ctgagcctgctgggccgaaatgccgccaacctcaagcacattagccaacgcaccggtgcc
cacatccacttccccgaccccagcacattgttacccactcacgctcacacacgccgatcc
agcgtctacattcaaggcagcatcgacgccgtgtgtgacgccaggcagcagctcatgggc
tgcttgcctctggttttaatgttcgacattaaggaggaggctgagatcgagccccagtgc
gtcactactcttatggagcagctagacgtctttatcagcattaaaccaaaacccaaacaa
cccagcaagtctgtgattgtgaagagcgtggagagaaatgcggtgaacatgtatgaggct
cgcaggctgcttctggctctggagagcgcatgtggatcttctaccagttccccagtttct
tcttcgtttcctctccgtaccaacagcgtccctgttaatgcgcacacctcttctccttct
tcatcttcctcctcctcaatactcctcaaccctgatggactggacgccttggtctcagct
ggactgggactaagcactctaggtctcttaacttccccagatgttcccactcgtagcagc
tcgtctgattctaacccggttctaaacgggcacgttcctgtcccaaatggacataatgat
gtagtcgggacactacagaacagcagctgtaaccacaccctcgctcagttacaggggtct
tccctctggaccaacactcacactacatcagcaaacactgcagggttctcctctgtcctg
atgttacagtctgcctctcagggttctctcagtggcctgttgctgtccggggtacacagt
tacagccagaattacacacacactccctctctctctcacacacacacaccttcaccccca
ccaggtctggcaccaatccacaaaccagtgagcacagagcaacttaaagcacatatgcct
tctatgtatagagggatttcatctgtgtcaatgactgaatccatgcttggccccgcccac
tgtgactcagcacaggaagttaatggacacagccaatcagaagctctttccagcaaatct
agctctgatgagggctcggacacatttgttgaagtaggcatgcccagaagcccctcccac
tcagccaatgggatcgaactgaaacagatgctgtcttcctgtagagtgtcgtcaggaaag
cgacaaactgtcgaactcctccaaggcactaagaatctccggtcagactgtctgttgtct
gatgctgagactgatgcagtagctgataagagagcaccaggcagcgagagagcagctgag
aggaacagacttgcccctcatatacatgcatatgactatgaaaagaagaagctactcgct
actaaagccatgctaaaaaagccagtggtgactgaggttcggaccccgacgaacacatgg
agcgggctcggcttttccaagtccatgcctgcagagagcatcaagcagctccgcagaccc
agccatacagcctacaaaccctcaggcaataccacgtgtcagggcacttctctgtcttgc
aaaggcaccagggagactccaggtaacaacaatcctgagagttggcacacaagaaacggg
aatcgcgttattaacggcaatggagcagcaacccacgcgttctcctccgccatcggtgct
ccagagaggagcaagagccggagcgccatggatcagtacctgagcagtagtaactacatg
gagtgtatctcatttatgggtggcaatacagcatcgtctctgagctcttctctcaaaggt
acagacctgcctgagctcttcagcaccctgggactgggcaaatacactgatgtgttccag
cagcaggagattgatctgcagacgtttgtcacactaacagatccagatttgaaggaactg
ggaatcgcaacgtttggagcacgtaggaaaatgctgctggctatctcagagctaaataaa
agccgacgggagctttttgagtcttcgaacatccgcccatccttcctggagggcggagcg
aacagtcgtctggcgcgtcacttcaacgccgacatggccagcgtgagtgggcgctggtga

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