Silurus meridionalis (southern catfish): 124390378
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Entry
124390378 CDS
T08004
Symbol
snx6
Name
(RefSeq) sorting nexin-6 isoform X1
KO
K17920
sorting nexin-5/6/32
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124390378 (snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390378 (snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124390378 (snx6)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Macropinocytosis
Sorting nexins
124390378 (snx6)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124390378 (snx6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAN1_HTH
AAA_lid_7
AceES-2
Motif
Other DBs
NCBI-GeneID:
124390378
NCBI-ProteinID:
XP_046712233
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Position
8:complement(16095578..16103502)
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AA seq
407 aa
AA seq
DB search
MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEEYAGFIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDSSIKSDRMIRSHK
SAAEDINRIASTLYTLGTQDSTDMCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRGRALVDYENANKALDKARAKNKDVLQAETSQQVCCQKFEKISESAK
QELVDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCLAVLKGDT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagaagggctggacgatggtcccgatttcctctctgaagaggacagaggacca
agggccgttaacgtggaccttcagaccgatgcaacgttgcaagtggacatttcagatgct
ctgagtgagagagacaaagtaaaattcaccgtccatacaaagagcactcttcccaacttc
aaacagaacgaattctctgtggtgagacaacatgaagagttcatctggcttcatgactcc
tttgttgagaatgaggaatatgccggttttattattccacctgctcctccaagaccagac
tttgatgcatcacgagagaagctgcagaagctgggtgagggtgaaggctccatgaccaag
gaggaattcactaaaatgaaacaggagcttgaggctgaatacttggccatcttcaagaag
actgtggcgatgcacgaggttttcctctgccgtgttgctgcacatcccgtcctacggaaa
gacttaaactttcatgttttcttagagtacaaccaagatctgagtgtacgaggcaaaaac
aagaaagagaaacttgaggactttttcaagaatgtggtgaagtctgccgatggagttctg
gtggcaggtgtgaaggatgtagatgacttctttgaacacgagaagaccttcctcttagag
taccataaccgtgtcaaggattcctccattaagtctgacaggatgatcaggtctcacaaa
agtgctgcagaagacatcaacagaattgcctccacgctgtacactttagggacccaggac
tcaacggacatgtgcaaatttttcttgaaagtgtctgaactttttgagaaaacacggaaa
atcgaagcacgagttgctgctgatgaggacctaaaacttgctgacttgttgaagtattac
ctccgggaatcccaagctgccaaggatctgctttacagacgaggaagggcattagttgat
tacgagaatgcaaacaaagctctggacaaagccagggctaaaaacaaagatgtccttcaa
gcagaaaccagccagcaagtttgctgtcagaaatttgagaaaatctctgaatcggctaaa
caagagctggtagatttcaaaacaagaagagtagcagcattcagaaagaacttggtggaa
ctagctgagcttgaactcaaacatgctaagggtaatctccagttgctgcaaagctgcctt
gctgttctaaaaggggacacttaa
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