KEGG   Silurus meridionalis (southern catfish): 124390378
Entry
124390378         CDS       T08004                                 
Symbol
snx6
Name
(RefSeq) sorting nexin-6 isoform X1
  KO
K17920  sorting nexin-5/6/32
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124390378 (snx6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:smeo04131]
    124390378 (snx6)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:smeo04990]
    124390378 (snx6)
Membrane trafficking [BR:smeo04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    124390378 (snx6)
Domain-containing proteins not elsewhere classified [BR:smeo04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   124390378 (snx6)
SSDB
Motif
Pfam: PX Vps5 FAN1_HTH AAA_lid_7 AceES-2
Other DBs
NCBI-GeneID: 124390378
NCBI-ProteinID: XP_046712233
LinkDB
Position
8:complement(16095578..16103502)
AA seq 407 aa
MMQEGLDDGPDFLSEEDRGPRAVNVDLQTDATLQVDISDALSERDKVKFTVHTKSTLPNF
KQNEFSVVRQHEEFIWLHDSFVENEEYAGFIIPPAPPRPDFDASREKLQKLGEGEGSMTK
EEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPVLRKDLNFHVFLEYNQDLSVRGKN
KKEKLEDFFKNVVKSADGVLVAGVKDVDDFFEHEKTFLLEYHNRVKDSSIKSDRMIRSHK
SAAEDINRIASTLYTLGTQDSTDMCKFFLKVSELFEKTRKIEARVAADEDLKLADLLKYY
LRESQAAKDLLYRRGRALVDYENANKALDKARAKNKDVLQAETSQQVCCQKFEKISESAK
QELVDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQSCLAVLKGDT
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgatgcaagaagggctggacgatggtcccgatttcctctctgaagaggacagaggacca
agggccgttaacgtggaccttcagaccgatgcaacgttgcaagtggacatttcagatgct
ctgagtgagagagacaaagtaaaattcaccgtccatacaaagagcactcttcccaacttc
aaacagaacgaattctctgtggtgagacaacatgaagagttcatctggcttcatgactcc
tttgttgagaatgaggaatatgccggttttattattccacctgctcctccaagaccagac
tttgatgcatcacgagagaagctgcagaagctgggtgagggtgaaggctccatgaccaag
gaggaattcactaaaatgaaacaggagcttgaggctgaatacttggccatcttcaagaag
actgtggcgatgcacgaggttttcctctgccgtgttgctgcacatcccgtcctacggaaa
gacttaaactttcatgttttcttagagtacaaccaagatctgagtgtacgaggcaaaaac
aagaaagagaaacttgaggactttttcaagaatgtggtgaagtctgccgatggagttctg
gtggcaggtgtgaaggatgtagatgacttctttgaacacgagaagaccttcctcttagag
taccataaccgtgtcaaggattcctccattaagtctgacaggatgatcaggtctcacaaa
agtgctgcagaagacatcaacagaattgcctccacgctgtacactttagggacccaggac
tcaacggacatgtgcaaatttttcttgaaagtgtctgaactttttgagaaaacacggaaa
atcgaagcacgagttgctgctgatgaggacctaaaacttgctgacttgttgaagtattac
ctccgggaatcccaagctgccaaggatctgctttacagacgaggaagggcattagttgat
tacgagaatgcaaacaaagctctggacaaagccagggctaaaaacaaagatgtccttcaa
gcagaaaccagccagcaagtttgctgtcagaaatttgagaaaatctctgaatcggctaaa
caagagctggtagatttcaaaacaagaagagtagcagcattcagaaagaacttggtggaa
ctagctgagcttgaactcaaacatgctaagggtaatctccagttgctgcaaagctgcctt
gctgttctaaaaggggacacttaa

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