Silurus meridionalis (southern catfish): 124390404
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Entry
124390404 CDS
T08004
Symbol
ddx24
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX24
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smeo03009
]
124390404 (ddx24)
Enzymes [BR:
smeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124390404 (ddx24)
Ribosome biogenesis [BR:
smeo03009
]
Eukaryotic type
Pre-60S particles
Helicases
124390404 (ddx24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
DUF2027
DsrH
Motif
Other DBs
NCBI-GeneID:
124390404
NCBI-ProteinID:
XP_046712267
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All DBs
Position
8:19103878..19108534
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AA seq
829 aa
AA seq
DB search
MKTKGVKATKRFGPSKRGILVKGKWKAVELDPSIFAHETLGEVVCFEELSNYSLVDSKKA
GVIPGLLEDKKKKKKKRKATEVEEHALEEDQDEMKHLSSKECPAKKRKKKTKQYKSDDEL
TDDEREHMESLADEGESETLQDSDEYTELPAETTQKTKKKKKKRRKKKATEKSLTDNKVD
PANVVLVPSKSKSKNWADLSKPAGQDADVSAWKDLYVPEPVLKALSKLGFSAPTPIQALA
LPPAIRDHLDILGAAETGSGKTLAFGIPIIHSILAWKETLDSKNASEEQSDSVAEVHSIY
LPSVTVLNDERDETNPTEDEGIVSGEKEDDDCGSADDRHCQDEDDVPGDEEDALQGKSFT
TKKEEKDDRKQPLLGLVLTPTRELAVQVKHHIDAVAQFTDIRTALLVGGMAPQKQDRMLK
RRPEIVIATPGRLWEMIQDKHPHLCNLKQLRCLVIDEADRMVEKGHFAELENLLEMLSTS
QFNPKRQTFVFSATLTMIHSLPSRVLHKKGKKLEXSGKLELLMEKVGIKGKPKVIDLSRK
EATVETLTETRIQCVAEEKDYYLYYFLLQYPGRTMVFANSIDCIKRLNSLLTILDCTPLP
LHANMHQKQRLKNLERFAERESCVLLTTDVAARGLDIPDVQHVIHYQVPRTSETYVHRSG
RTARAAKEGLSLLLIGPDDMMNYKKIYRTLGKDEDLPMFPVQNKCMTAIKERVDVARKIE
KIEFYNSRQKQHNSWFRQAAEEMDIDLDDDMLLGGGRDEEDETEQQKHVKGLKKHLKHLL
SQPVFKIYMKTKYPTQMGKLHLPELMLTQETALISVTKEKDKSKQKKRK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaaggcgtgaaggcgacaaagcgctttggaccttccaaaagagggatccta
gtaaagggcaaatggaaggccgtggagctcgatcctagcatttttgcacatgagaccttg
ggagaagtggtgtgttttgaggaactctcaaattattccctggttgactctaaaaaggcc
ggagtcatccctgggctcttggaggacaaaaagaagaaaaaaaagaagaggaaagccact
gaggtggaggaacatgctttagaggaagatcaggacgaaatgaaacatctgtcatccaaa
gagtgtcctgcgaagaagagaaaaaagaaaacgaagcagtataagagtgatgatgagctc
actgatgatgagcgtgaacacatggagagtttggctgatgaaggagagagtgaaacacta
caagactctgatgagtacactgagcttcctgcagagacaacacaaaagaccaagaagaaa
aaaaagaagagaaggaaaaagaaagctacagaaaaatcattgactgataataaagtagac
cctgctaatgttgttctggttccatctaaaagtaaatccaagaactgggcggatttgtcg
aaaccagcaggtcaggacgccgatgtatcggcatggaaagatctctatgtaccagagcct
gtgctaaaggcactgagcaaacttggattttctgcacctacaccaattcaagctcttgct
cttcctccggcaattcgagatcacctggacattcttggtgcagcagaaacaggaagtgga
aagactttggcttttggaattccgatcatccacagtatattagcgtggaaggaaaccctt
gacagtaaaaacgccagtgaggaacagtctgattctgttgcagaggtgcatagcatttac
ttgccttcagtcacagttttaaatgatgaacgagatgaaacgaatcctacagaggatgaa
ggtatcgtgagtggtgaaaaggaggatgacgattgcggttccgctgatgaccgtcattgt
caagatgaagatgacgtaccaggcgatgaggaagatgcactccaaggcaagagctttaca
acaaagaaagaagaaaaagacgacagaaaacagcctttgcttggacttgttcttactccg
accagagaactagcagtgcaagtcaagcatcatattgatgctgtagcacagtttacagat
attaggactgctcttttggtgggcgggatggcaccgcagaaacaagacaggatgttaaaa
cgcaggccagagattgttatcgcaacaccggggcgtctgtgggagatgattcaggataaa
catcctcatctgtgcaacctaaagcagctcaggtgtttggtcattgacgaagctgatcgc
atggttgaaaaaggtcattttgctgagcttgagaatctactggaaatgctcagcacatcc
cagttcaacccgaagagacagacctttgtgttctccgccacactgaccatgatccacagc
ctcccttctcgagtgctacacaagaaaggaaagaagctggagnncagcggcaaactggag
ctgctaatggaaaaagtagggatcaaaggcaagcctaaagtgatcgacctcagcaggaaa
gaagccacagtggagacgctgactgaaaccaggatccagtgtgtcgcggaggagaaagat
tattacctctactacttcctgctgcagtaccctgggcgcactatggtgtttgccaacagc
atcgactgcatcaagaggcttaattctctgctaactattttggactgcaccccactgcca
ctgcatgctaacatgcatcagaaacagcgactgaaaaacttggagagatttgcagagagg
gagagctgtgtccttctcacaacggatgttgctgctcgagggctggacattccagatgtc
cagcatgtcatccactatcaggtcccccgcacttctgagacgtatgtccatcggagtggg
cgtactgctcgtgctgcaaaagagggtctcagtttgcttctgattggtccagatgatatg
atgaactataagaaaatctataggacgctgggcaaggatgaggatcttccgatgtttcca
gttcagaacaaatgcatgactgccattaaggaacgtgtcgatgtggcaagaaaaatagaa
aagattgaattctacaacagccgacaaaagcagcacaattcctggtttagacaagcggca
gaggaaatggacatagaccttgatgatgacatgcttttgggaggaggcagggatgaagag
gatgaaacagagcaacagaaacatgtgaaaggcttaaagaaacacctgaagcacctgctg
tcccagccagtcttcaaaatctacatgaagactaaataccctactcagatggggaaactt
catctgccagagctcatgttgacacaagaaacagctctcatcagtgtgacgaaagaaaaa
gacaaaagcaaacagaagaaacgaaaatga
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