Silurus meridionalis (southern catfish): 124390486
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Entry
124390486 CDS
T08004
Symbol
wdr20a
Name
(RefSeq) WD repeat-containing protein 20 isoform X1
KO
K24741
WD repeat-containing protein 20
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124390486 (wdr20a)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
124390486 (wdr20a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
EIF3I
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_IFT122_1st
Ge1_WD40
NBCH_WD40
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
124390486
NCBI-ProteinID:
XP_046712402
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Position
8:complement(56942..64232)
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AA seq
624 aa
AA seq
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MAAEGGGGKEMNEIKTQFTTREGAYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQS
GNGERICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLL
VGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGSMYLYNV
EHACGTAAPHYQLLKQGESYTVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFVACAS
QDGFLRVFHFDGAELHGTMRSYFGGLLCVCWSPDGRYVVAGGEDDLVTVWSFGERRVVAR
GHGHKSWVSVVAFDHYTTSVEETEPNEFSGSDDDLQEQALAGRERANSTHSRLSKRNSTD
GRPLSVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSLPVPGGGGGSG
GGSGGGSGGGGGTIIASINNPSANGGSSSSSSNSGSNTPGNSVPAPLPRSNSLPHSAASS
GSGNTKSGTMDTTNAVPSSVSKFATLALHERKERHHDKEHKRNHSMGHISSKSSDKLHLL
TKTSRADAAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICT
WARPGKVGLLSSQNQANSPSGTVV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggaggaggagggaaggagatgaacgagattaaaactcagttcaccacc
agggaaggcgcttataaactccttacacactccgagtacagccgccccaacagggttccc
ttcaactcccagggctcgaaccccgtcaaagtctcgttcgtgaacgttaatgaccagtcc
gggaacggagagcggatctgcttcaatgtgggccgggagctttacttctacatctacaaa
ggcgtcaggaaggcagctgacctgagtaagccaatagataagagaatatacaagggaaca
cagccgacctgccatgactttaaccatctcactgctacagctgagagtgtgtcactgctt
gtgggcttctcagcaggacaggtgcagctcatcgaccccatcaagaaagagacgagtaaa
ctcttcaacgaagaaagactcatagacaaatccagagtcacgtgtgtaaaatgggtcccc
ggctccgagagcctgttcctcgtagcccattccagtggcagcatgtacctgtacaatgtg
gagcatgcgtgtggtactgctgcaccgcactaccagctgctgaagcagggtgagagttac
actgtgcacacgtgcaagagcaagtcaacacgtaaccctctgctgaagtggacggtcggc
gagggtgccttgaacgaattcgctttctcacccgatggcaagtttgtggcatgtgcaagt
caggacggtttcctgcgcgtgttccacttcgacggtgccgaactgcatggaactatgcgc
agctacttcggtggtctgctttgtgtgtgctggagcccagatggtcgctatgtagtagcg
ggtggtgaggatgatctggtgacggtgtggtcattcggagagcggcgtgtggtcgctcga
ggccacgggcacaagtcctgggtcagcgtggtggcgttcgatcattacaccaccagcgta
gaggagaccgaacccaacgagttcagtggcagcgatgatgacctgcaggagcaggcgctc
gcaggccgtgaacgtgccaacagcacacattcacgcctctcaaaacgaaactccacagat
ggacgtccgctcagcgttacctaccggtttgggtctgtgggacaggacactcagttgtgc
ctttgggacttgacagaggatattttgttcccacatctaccgttatcccgaaccagaacc
cacaccaacgtcatgaacgctacgagtctcccggtcccgggagggggtggaggaagcggt
ggaggaagcggtggaggaagtggtggaggtggtggaacaataatcgcaagcatcaacaac
ccaagtgccaacggaggaagcagcagcagcagcagcaacagcggctccaatacgccaggc
aactctgtgcctgcgccgctgccgcgctccaacagccttccgcactctgctgcctccagt
gggagtggcaacaccaaaagtggcaccatggacaccaccaacgcagtgccctcaagtgta
agcaagttcgctacattagcactgcatgagcgcaaggagcgacaccatgacaaggagcac
aagcggaaccacagcatgggccacatcagcagtaagagcagtgacaaactgcatctgctg
actaagacgagccgagcggacgcagccaagacgctaggtacaccactctgtccgcgaatg
gaggatgtgcccctgctcgagccactcatttgcaagaaaattgcacatgagcgactcact
gtacttatctttcttgaggactgcatagtcactgcatgtcaggagggatttatttgcacg
tgggccaggcctgggaaagtgggtttattgtcctcccaaaaccaagccaactctccgagt
ggaacagtagtatag
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