Silurus meridionalis (southern catfish): 124390496
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Entry
124390496 CDS
T08004
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390496 (trappc12)
Membrane trafficking [BR:
smeo04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124390496 (trappc12)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_16
TPR_6
TPR_17
TPR_14
TPR_8
ANAPC3
TPR_MalT
TPR_9
Coatomer_E
TPR_11
RPN7
Motif
Other DBs
NCBI-GeneID:
124390496
NCBI-ProteinID:
XP_046712423
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Position
8:20430506..20465416
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AA seq
791 aa
AA seq
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MDSGEDAAQRPSTLDIAGLERDKSLVLAPSDDTAMTSLASMTDTLFQEESIDLDVEAFLS
PQDDSAASGSVTDKLNDQMLESVMISDSPNSEEEDVPIDTLLEQKDDKESLDSKEPEEGK
VFEAKEDETEAGIEQASPDDAVESEASLTLVEKEKTEDSDMDSVKEVVTDPAPALSSPKA
EETELEVAKHVIKEEPIPVCTIFSQGMQNKAQSLVPDGFQPTLVKSPSFTTGHNETPNKL
APLVSQPSPSLSKFFTDNGTVNPASDFFDSFTTSSSFISVSNPNAETAKSPAPPERQLSS
GSSSLLPDGGTFFSPALNVSTPRPVQGPADPVVTISKFQAVFSGSDDPFASALRMSEVDK
RYDAWLPSEETRRVLISVATQQVNPVHVDRERLSMPGLKFDNLQGDAVKDLMLRFLGDQA
AAKRQVLNANSVEQNFFGLKQLIGTKNWRAAVDLTGRLLTAHGQGYGKSGQPSTNTTDTL
QLWFVRLALLVKLNLFQNAELEFEPFGHLDQPDLYYEYYPTAYPGRRGSMVPFSMRVLHA
ELPQYLNKPQESLDRLHSMKSICQKILDNLEEGLAEDGSMMTLTQENRQASIQLWRSRLC
RVMYSMANCLLMMKDYVLAVETYHSIIQYEPQQTVQLLSGIGRIFLQIGDIKTAEKYFQE
VEQAAQEKGKGPVHDMAVLMNRAFVHLSQNNYADAHTCFSDVLKIDPNNPVANNNAAVCL
LYLGRLKESLGQLESLVQQDPAFYLHESVLFNLTTMYELESSRSTQKKQALLEAVARREG
DSFNTQCLKLV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtgaggatgcagctcaaaggccttcgactctagatatagccggattagag
agagacaaatctttagtccttgcaccttcagacgacactgcgatgaccagccttgccagc
atgacagataccctcttccaagaggagagcattgacctggatgtagaagcgttcctttcc
ccgcaggatgacagcgctgcgtctgggagcgtcacagataagctgaatgatcagatgttg
gagagcgtcatgatctccgattcgcccaacagcgaggaggaagatgtcccgattgacact
ctgttggagcaaaaagatgacaaggagtcccttgactccaaagagcctgaggaaggcaaa
gtgtttgaagccaaagaggacgagacagaggctggaattgaacaagcctctcctgatgat
gctgtggaatcagaagcatctctaactttagttgaaaaagagaaaacggaggacagtgat
atggacagtgttaaggaggtggttacagacccagcacctgctctaagcagccccaaagct
gaggaaaccgagcttgaagtagccaagcatgtgattaaggaagagcccattcccgtgtgc
actatattcagccaaggcatgcagaacaaagcacaatccctggtacctgacgggtttcag
ccgactttggtgaaatcgccaagctttacaactggccataatgaaactcccaataaacta
gcacctctggtgtctcagcccagccccagcctcagtaaattcttcaccgataacggcaca
gttaatcctgcctcagatttcttcgactccttcacgacgtcctcatcgttcatttcggtt
agcaacccgaacgcagagacggcaaagtccccagcccctcctgagcgccagctttcctca
ggctcaagcagccttctaccggacggaggcactttcttcagtcctgctcttaacgtgagc
acaccgaggcctgtccagggccctgcagatcctgttgtgaccatttctaagtttcaggcg
gtgttctcaggcagcgatgatccgtttgcaagcgctctgagaatgagcgaagtggataaa
cgatatgacgcctggcttccctctgaggagaccaggagagtgctgatctctgtggccact
cagcaggtcaacccggtgcacgtagatagggagaggctgtctatgcctggactcaagttt
gacaatttgcagggtgatgcagtgaaggacctgatgctgcgtttccttggagaccaggca
gcggcgaagaggcaagttctcaacgctaactcggtggagcagaacttctttggtctaaag
cagctgattggcacaaagaactggcgggcagccgtcgacttaactggcagactactgact
gctcacggccaaggctacggcaagagcggccagccgagcacaaacaccaccgacacgctg
cagttatggtttgtacgtctggctctgttggttaagctcaacctcttccaaaatgcagag
ctggagttcgagccgttcggtcacttggatcagccggacctgtactatgagtactatccc
acagcgtaccctggaagacgaggttcgatggtgccgttctcaatgcgtgtgctgcatgct
gaactgcctcagtacttaaacaagccccaggagtctctggaccgcctgcacagcatgaaa
agcatctgtcagaaaatcctggataacctggaggaaggactggctgaggacgggagcatg
atgactctaacacaggaaaacagacaagcctctattcagctgtggaggtcacgtctgtgc
cgggtgatgtactccatggcaaactgtctgctaatgatgaaggactacgtgctggctgtt
gagacgtatcactcgatcatccagtatgagccgcagcagacagtgcaactgttgagtgga
attggacgcatcttcctacagattggagacattaaaaccgccgagaagtatttccaggaa
gttgagcaagccgcacaggaaaaaggaaaaggaccagttcatgacatggcggttttaatg
aacagggcatttgttcacctgagccagaataattatgcagacgcccacacgtgtttctcc
gacgtcttgaaaatcgatcccaacaatccagtggcgaacaacaacgcagcagtgtgctta
ctttatctgggtcgcttaaaggaatcactgggtcagctagagagcctggtgcagcaggac
cctgcattctacctacacgagagcgtgctcttcaacctgactactatgtacgaactggaa
tcatcacgcagcacgcaaaagaagcaggcgctgctggaggccgtggccaggcgcgaagga
gacagcttcaacacacagtgcctcaaactggtgtaa
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