Silurus meridionalis (southern catfish): 124390517
Help
Entry
124390517 CDS
T08004
Symbol
sash1b
Name
(RefSeq) SAM and SH3 domain-containing protein 1 isoform X1
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
124390517 (sash1b)
Domain-containing proteins not elsewhere classified [BR:
smeo04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
124390517 (sash1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPIDER
SAM_1
SAM_2
SH3_2
SHOCT-like_DUF2089-C
WDCP
SH3_1
Motif
Other DBs
NCBI-GeneID:
124390517
NCBI-ProteinID:
XP_046712462
LinkDB
All DBs
Position
8:17068762..17133791
Genome browser
AA seq
1179 aa
AA seq
DB search
MMSSGPTIVYEWLKTLQLTQYVESFVDNGYDDLEVCKQIGDPDLDAIGVFPPHHRLKVLR
AVQRLREEDKKLAPGLYFTLEPLPDVSNVYDSKATGSNWERERLELSNNNNLLLGVPEDP
MSFPKLKLKILIRDKLIKDGIDLSKPPYSIKDGSLGNIEDLAKEYSEYYSTSYGDVCERM
EELRKRKVAQETEITLTESMITSLQLRSEIQESLGLSSTVSTPEVERRLFMHKSGSEDGS
GGKWDRKKNKSFWQNFRKTQKGIIRQTSKADDLGFVASEITMSDEERIQLMMMVKEKMIT
VEEALARLKEYEAHNRQSCTTDTTEWNDASSPNANNLSVSFTSQEQSDDELEDSQAFRRL
HKLVNSTRRVKKKLIRIDESKKHTSKDSLSSDFSPTCEEKASLYSGVQKHLVMSQGDGMA
SALCVDGDSDSLTTSPSSSSLDTYSGYKQFKLFNSSQGLSYPPTGPSVDTSMMDAGSHSS
FSEAEGCCEEEPRITRSVTDGEMRRALSPLKLHGRACSFGGFDLMNQSLYTRHSCNTSSD
NGTISRRDAARSPTPSRISLGKKVKSVKETMRKRISKKSSSVLFEQLSLSREPESLQSPH
TDTDSLEKPKLKSGGSVESLRSSLSGQSSMSGQTVSTTDSSASNRESVKSEDGDDEELPY
RGPFCGRALVHTDFIPSPYDTDSLKLKKGDVIDIISKPPMGTWMGLLNNKVGTFKFIYVD
VLSEEIEKTKTSIRKRRKSRPPKPTSVEELLERINLKEHMPTFLFNGYEDLETFKLLEEE
DLDELNIRDPQHRAVLLTAVELLQEYDINSDPETSGSVVDPDDKVQPELSTPSRDSPRDS
GCYESSENLENGKGKKTSHLSRSSSGFESSHLPSPEYPTSPLSQSSSRQDPQSHLTPFQI
TSIKDVHLETTCSLLRIKPLSHSYDELLRIPVPQGLWKRSLSLDYQILHRKEPSNPEDLT
PTQPIKPDALLQRYSPAEQDEALEAKHEDESEELGTGDELTFPSVDSSTDVESEEVPIDS
AETYPPDPSLHPPRIKPPVPPKPHPLFTDRETTNPDNKHVFPNTTIPHKSDMASDFPKSS
KPFIHRLGKKVQHPQPTNLELLVEQKLSLDGIDLTEEPYSDKHGRYKVPFSLIQRYSEDL
DKPLGDIATAMDQTRVQLLRKQHRMAIPLRGLSEICIKL
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagcggtcctactatagtttacgagtggctgaaaaccctgcagctcacccag
tatgtcgagtcttttgtggataacggctacgacgacctggaggtgtgtaagcagattgga
gatcctgacctggacgccatcggtgtgtttcctccgcatcacaggctcaaagttctccga
gcagtgcagagactgagagaggaggacaagaagctggccccgggtctttactttaccttg
gagccacttccagatgtctccaatgtctatgacagcaaagccactgggtccaattgggaa
agagaaagacttgagctgtccaataacaacaatctactgctcggagtccctgaagatcca
atgtctttcccgaaactcaagctcaagatcctgatccgagataagctgatcaaggatggg
atagatctgagtaagcctccttactccattaaggatggctctttgggaaacattgaagat
ttggctaaggagtactcagagtattacagtacctcttacggtgacgtgtgtgagaggatg
gaggagcttcgcaaacgcaaagtggctcaggaaacagagattacacttactgagtcaatg
attacatcacttcagctacgttcagaaatccaggaatccctggggctgagcagtaccgtg
tccactcctgaggttgagagaaggctgttcatgcacaagtcaggctcagaagatggatct
ggaggaaaatgggacagaaaaaaaaacaaatccttctggcagaatttccgcaagacccag
aaaggcattatacgccagacatcaaaagctgatgaccttggctttgtagccagtgagatc
acaatgagcgatgaagaacgtattcagctgatgatgatggtgaaggagaagatgataact
gtagaagaggccttggcacggctgaaagagtacgaagctcataatcgtcagtcctgcacc
acggacacaactgagtggaatgatgcctccagtcccaatgcgaacaacctctcagtgagc
tttacctcacaggagcagtcagatgatgagctggaggactcgcaggcttttcgcaggctt
cacaagctggtcaactcaactcgccgtgtaaagaagaagctcattagaatagatgagagc
aaaaaacacacatcaaaagactcattgagctcagacttctctcccacatgcgaggaaaaa
gcctctctctactcgggtgtacagaagcacctagtcatgtctcagggtgatggaatggcc
tcagctctgtgtgtggatggcgattcagacagcctgaccacatctccatcttccagcagc
ctggacacctacagtggctataagcaatttaagctgtttaacagtagccaggggctaagc
taccctcccactgggcccagtgtggacacttcaatgatggatgcaggcagccactcatcc
ttttccgaagctgagggctgctgtgaggaggagccgaggataacccgctctgtgactgat
ggagaaatgcgacgggccctgagccccttgaaattacatgggagggcatgtagctttgga
ggttttgacctaatgaaccagtctttatacacacgacacagctgtaacacatctagtgat
aatgggaccatcagcaggagggatgcagcgaggtcacccactccgtcccgcatctcgctt
gggaagaaggtgaagtcggtgaaggagaccatgaggaaacgcatatccaagaaaagcagt
tctgtcctgtttgagcagctaagtctaagcagagagcctgaatcactccagtccccccac
acagacacggactcgctggaaaaacccaaactgaagtctggcggttctgtcgagagtttg
aggagctcactaagtgggcagagctcaatgagtggtcagacggtaagcactacagactcc
tctgcaagtaacagagagagtgtgaaatcagaagatggtgacgacgaagagttgccttac
agggggccattttgtggcagagcccttgtacacactgactttatccccagtccctatgac
acagattccctcaaactcaagaaaggggatgttatagacataatcagtaagcctccaatg
ggtacatggatgggcctcttgaataacaaagtgggcaccttcaagttcatctatgtggac
gtgctgagtgaggaaattgaaaagaccaaaaccagcatcaggaagagaaggaagagtcga
cctcccaaacccacgtctgtggaggagcttctagagcgcatcaaccttaaagaacacatg
cccacattcctgtttaatggatatgaggatctggaaacgtttaagttacttgaggaggag
gatctggatgagctgaacatcagagacccacagcacagagcagtgttgctgactgcagta
gagttgctgcaggagtatgacattaacagtgaccctgagaccagtggttctgtagtagac
ccagacgataaggttcagcctgagttatcaactccctcaagagattctccacgcgactct
ggttgctatgagagcagtgagaatctggagaatgggaaaggcaaaaagacatctcattta
agcaggtcatcatcaggctttgaatccagtcacctgccatctcctgagtatcccacttct
cctctaagccagtccagcagcaggcaggatccacagtctcacctgacaccttttcagata
acctccatcaaagatgttcatttagaaacaacttgctccttgctcaggataaagcctctc
agtcacagctatgatgagttgcttcgcattcctgtacctcaaggcttgtggaaacgttct
ctttcattggattatcagatcctccacaggaaggagccatctaacccagaagacttgaca
ccaacccaacccataaaacctgatgctttgctgcagaggtatagccctgccgagcaagat
gaagctctagaggccaaacatgaagatgaatctgaagagctaggaacaggagatgagctg
acatttccttctgttgactcttccacagatgtagagagtgaggaggtgcctatagatagt
gctgaaacatacccacctgatccttctttacacccacctcgcataaaaccacctgttcct
cctaaacctcatccactttttactgacagagagacaacaaaccctgataacaaacacgtg
ttcccaaacacgacaattccacacaaatcagacatggcctctgattttcccaagtccagc
aaaccttttatccacaggcttggaaagaaggtgcagcatccccaaccaactaatctggag
ttacttgtagaacagaagttaagtttggatggtatagacctcacagaggagccttattct
gacaagcatggtcgatacaaagtcccattctccctaattcaaagatattctgaagattta
gataagcctttgggggatattgccacagcaatggatcagaccagagtccagctgcttcgc
aaacagcaccgtatggcaatcccactaagaggtttatcagagatttgtataaagctgtga
DBGET
integrated database retrieval system
