KEGG   Silurus meridionalis (southern catfish): 124390583
Entry
124390583         CDS       T08004                                 
Symbol
lrr1
Name
(RefSeq) leucine-rich repeat protein 1 isoform X1
  KO
K10348  LRR-repeat protein 1
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smeo04121]
    124390583 (lrr1)
Ubiquitin system [BR:smeo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     124390583 (lrr1)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_14 LRR_1 LRR_LRWD1 LRR_9 LRR_R13L1-DRL21 NoBody
Other DBs
NCBI-GeneID: 124390583
NCBI-ProteinID: XP_046712551
LinkDB
Position
8:complement(5559..16499)
AA seq 421 aa
MKLQCDVEVVNRMLPTFGLRNRGRGSRAVLSIGRHVDQKTQIPSVYLLICTAKDRTGSKY
KLKENIEKFFTCFVEEGKATVRLKEPMVDICMSKADTSSLKNFLSAARLAHRGTIRDGLS
LSTLTPVRARDVEKPKKKLIITSKKDYPLTSSFPYSLEQLQVSYCKLSRVDMRMLSLKSL
RALDLSNNHIKKLPDTIGDLHFLTELILRNNRLESFSVALCLSSLQKSLQHLDLSQNGLK
LLPACFCKLRELVSLKLDENQLVQLPFHIGQLTKMRFLSAAHNKLTVLPGDFRKLSLENL
DLFGNPFTQPNPLDHSIHLTLPLSLEELASRAVLNSRIPYAPHLIPFHLCGDMELAKVCS
CGCTCIRSYVQTAGSMNLHLVSHTVVLVDDMGGTEAPIQRHFCSLTCYCQFLDSCVQRGL
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagctgcagtgtgatgtggaggttgtgaatcggatgctgcccacattcgggctgagg
aaccgaggtagaggctccagggccgtgctgtccatcgggagacatgtggaccagaagact
cagatacccagtgtctatctgctcatctgtactgcaaaagacaggactgggtccaagtac
aagctgaaggagaacatagagaagtttttcacatgctttgtagaagaggggaaagccact
gtacgacttaaagaacccatggtggacatctgcatgagcaaggcagacacttccagcctg
aaaaacttcctctcagctgctcgacttgcacacagaggaactattcgagatggtctttcc
ctctccacacttacccctgttcgtgccagagatgtggaaaaacccaaaaagaagctcatc
attacgtctaagaaggactatcccctcacatccagcttcccctactctctggagcagctg
caagtgtcttattgtaagctctccagggtggacatgcgcatgctgtctttaaaatcactg
cgagcgcttgacctcagcaataaccacatcaagaagctcccagacaccattggtgacctc
cacttcctgacagaactgattctccgcaacaaccgcttagagagcttcagtgtagccctg
tgcctctccagtctccagaaatctctgcagcatctggacctgagtcaaaacggcctgaag
ctgctgcctgcttgcttttgcaagttgcgtgaacttgttagtctcaaactggatgaaaat
cagctggtacaactgccctttcacatcggccagctcacgaagatgcgtttcctttcagct
gcccacaataaactcaccgtgctgcccggagactttcgcaaactgtcactggagaacctg
gacctgtttgggaaccccttcactcagcccaatcctcttgatcacagcattcatctcacg
ttacctctcagcctggaggagctggcctcccgagctgtgctcaactccagaattccttat
gcacctcatcttattccctttcacctttgtggagacatggaacttgcaaaggtgtgcagc
tgtggctgcacctgcattcgctcgtatgtacagacggccggtagcatgaacctgcacctg
gtgtctcacactgtggtgttagtggatgacatgggaggtacagaggctccaattcagcgc
catttctgctccctcacgtgttactgccagtttctggacagctgtgtgcagagaggcctg
agctga

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