Silurus meridionalis (southern catfish): 124390628
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Entry
124390628 CDS
T08004
Symbol
grm1b
Name
(RefSeq) metabotropic glutamate receptor 1b isoform X1
KO
K04603
metabotropic glutamate receptor 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04020
Calcium signaling pathway
smeo04068
FoxO signaling pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
smeo04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
124390628 (grm1b)
04020 Calcium signaling pathway
124390628 (grm1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124390628 (grm1b)
04082 Neuroactive ligand signaling
124390628 (grm1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
124390628 (grm1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smeo01009
]
124390628 (grm1b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
smeo04030
]
124390628 (grm1b)
Protein phosphatases and associated proteins [BR:
smeo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124390628 (grm1b)
G protein-coupled receptors [BR:
smeo04030
]
Metabotropic glutamate receptor family
Glutamate (metabotropic)
124390628 (grm1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
GluR_Homer-bdg
NCD3G
DUF5438
FtrD-like
tRNA-synt_His
AAA_34
Motif
Other DBs
NCBI-GeneID:
124390628
NCBI-ProteinID:
XP_046712639
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All DBs
Position
8:17004395..17025754
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AA seq
1174 aa
AA seq
DB search
MWSMMRMNCILYLSLLLLCATASNIYERSLVPRAVTRSVARMDGDIIIGALFSVHHQPSA
ENVAERTCGEVREQYGIQRVEAMFHTLDRINADPFLLPNITLGCEIRDSCWHSSVALEQS
IEFIRDSLISLREDGDGSKSCNDGTPFSQPVATKKPIAGVIGPGSSSVAIQVQNLLQLFN
IPQIAYSATSIDLSDKTLFKYFLRVVPSDTLQARALLDIVKRYNWTYVSAVHTEGNYGES
GMEAFKELASQEGLCIAHSDKIYSNAGEKHFDRLLRKLRERLPKARVVVCFCEGMTVRSL
LMAMRRLGVAGEFLLIGSDGWADRDEVVEGYEQEAVGGITMKLQSEEVTSFDNYFLKLRL
NTNTRNPWFAEFWQHRFQCRIPGHPQENMNYRKNCSGDLELRDGYESLEENYVQDSKMGF
VINAIYAMAHGLHDMHEHLCPGYVGLCEAMDPIDGSKLLDFLLRTSFTGVSGEDVWFDEN
GDSPGRYDIMNLQYVEPGVYDYINVGSWHEGMLSIDDYMIQMNRSEMVRSVCSEPCSKGE
IKVIRKGEVSCCWICTACKDNEYVQDEFTCKACELGWWPDKELQGCEPLPLHYLKWSHAE
SIVAVVFSCLGILVTSFVTFVFILYRDTPVVKSSSRELCYIILAGIFLGYICPFTLIAKP
TVASCYLQRLLVGLSASMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVAIAFA
LISLQLTLEVTLIILEPPSPIKSYPSIREVYLICNTSNMGMVAPLGYNGLLILSCTYYAF
KTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTSFSVSLSVTVALGCMFT
PKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKIACRSNSLLNMLKRKKNASGNANSNGKS
VSWSEPGSRQPPKGEHMWHRLSVHVKRQEGGSNQTAVIKPLTNTYHDTGLEFSDLSTKTL
YNVAEEDEGEPVRYNPPASPHLIAHRYSPESEPVKEMSTKQEFYTPEQHLTQKCILPQQA
FAENFQDVSPNLNCSITDLDDIINLPEPESGVMPPYRPLILQTQQVLPMQLNLYSKKPDP
LLEEEEEMENEQFGLLHGYMYNNAQIHDDEELVQIKLAMEDSLALMPPSPFRDSVGSGNH
IPNSPVSESILCTPPNVTYASVIFKDYKQSSSTL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtatgatgagaatgaattgcattttatatctgtcacttcttttgctctgtgct
acagccagtaatatatatgagagatcactggttcccagggctgtgacccgctcggtggcc
agaatggatggcgatatcatcattggcgccctgttttctgtccaccaccagccgtcagct
gagaatgtggctgagcgaacatgtggtgaggtcagagagcagtatggcattcaacgtgtg
gaagccatgtttcacactctggacagaattaatgctgacccatttcttctgcccaacatt
actttgggctgtgaaatcagggactcatgctggcactcatcagtggcattggagcagagc
attgaatttataagagactcccttatttcactgcgtgaggatggggatgggtcaaagtcg
tgcaacgatggaactccgtttagtcagccagttgccactaagaagcccattgcaggtgtg
attggacctggatcaagttcagtggccattcaagttcaaaacctgctgcagctgtttaac
atcccccaaattgcctactcagccactagcattgatctgagtgataaaaccctctttaag
tacttcctcagggttgtgccatctgacactcttcaagcaagggctcttttggacattgtt
aaacggtataactggacatatgtgtcagcagttcatactgaaggaaactatggggaaagt
gggatggaggcttttaaagaactggcatctcaggagggtttgtgtattgcccactcagac
aaaatctacagcaatgctggtgagaaacactttgacaggctactgaggaagctgagagag
cggctgcccaaagctcgagtggtggtgtgtttctgtgaggggatgacagtgcgtagtctc
cttatggccatgaggcgcttaggggtagctggagaattccttctcattggaagtgatggc
tgggcagatagagatgaggtggtggagggctatgaacaggaagctgtgggtggcatcacc
atgaagctccagtcagaggaggtcacttctttcgataattacttcttgaagctgcgcctc
aatacaaacaccagaaacccgtggttcgctgagttctggcaacaccgcttccaatgtcgc
atcccagggcacccacaggagaacatgaactacaggaagaactgctcaggtgacctagag
ctacgagatggttatgagagtctagaagagaactatgtacaagacagtaagatggggttc
gtcatcaatgccatttatgccatggctcatggcctccatgacatgcatgagcacctgtgt
cctggctatgtcggtctttgtgaggccatggaccccattgatggcagcaaactgctggat
tttctgctaaggacctcattcactggagtgtctggtgaagacgtgtggtttgatgaaaac
ggggattcaccaggcaggtatgacataatgaatctgcagtatgtggagcctggcgtgtat
gactacatcaatgtgggatcgtggcatgagggcatgttgagtattgatgattatatgatc
cagatgaaccggagtgagatggtccgctcggtctgcagtgagccctgctctaaaggcgag
atcaaggttattcggaagggggaggtaagctgctgctggatctgcactgcctgtaaagat
aacgaatatgtccaagatgagttcacctgcaaggcgtgtgagctgggctggtggcctgat
aaagagctgcaaggctgtgagccacttcccctacattatttgaaatggagtcatgctgag
tccatcgttgcagttgtcttctcttgtctgggcatcttagtgaccagtttcgtcactttt
gtcttcattctgtacagagacacacctgtggtcaaatcctcaagtcgagagctctgctat
atcatcctagctggcatctttttgggttatatctgtccattcacactcatagccaagccc
acagtggcctcctgctatctacaacgcctgttggttggcctctcagcctccatgtgctat
tcagctctggtcactaaaaccaaccgcatcgcccgtatcctggctggcagcaagaagaag
atctgcacacgcaaaccacgcttcatgagtgcctgggctcaggtagccattgcattcgcc
ctgatcagtttgcagcttacactggaggtcacactgatcattctggagcccccatcaccc
atcaagtcctacccaagcattagagaggtctatctcatctgcaacaccagcaacatgggc
atggttgctccgctcggctacaacggtcttcttattctcagttgcacctactatgctttt
aaaacccgcaatgttccagccaactttaacgaggccaagtacatcgctttcaccatgtat
accacatgcatcatctggctcgcttttgtacccatctactttggctccaactacaaaatc
atcacaacatcattctctgtgagcctgagtgtgactgtggccctgggctgcatgttcacc
ccaaagatgtatatcatcattgctaagccggaaagaaatgtgcgcagcgcctttaccacc
tcagatgtggtgcgcatgcatgtgggtgacggcaaaatcgcctgcagaagcaacagcctt
ctcaacatgctcaaacgcaaaaagaatgcctccggaaatgcaaattctaatggcaagtct
gtgtcatggtctgaaccaggttcaagacagcctccgaaaggagaacacatgtggcacaga
ctgtctgttcatgtgaagaggcaggagggcggctccaatcagacagctgtcatcaaacct
ctaactaatacctaccatgacacaggcctggaattttcagacctcagcaccaagactctg
tacaatgtagccgaggaggatgagggtgagccagtccgatataatcctcctgccagccca
cacctgattgctcacaggtattcccctgagagtgagcctgtgaaggaaatgagcacaaaa
caggaattttatactccggagcaacacttgacacagaaatgcattcttccccagcaggct
tttgcagaaaacttccaggatgtgtcccctaatttgaattgcagcataaccgatctggat
gacattataaatttaccagaaccagaaagtggtgtaatgccaccatatcgacctctcatt
ctacaaacacagcaggttttgccaatgcagctgaacctttactcaaaaaaaccagaccct
cttttggaagaggaggaggaaatggagaacgaacaatttggtctccttcatggctacatg
tacaacaatgcacaaatccatgatgatgaggaactggtgcagattaaactagcaatggag
gactctttggctctgatgccaccctctcctttccgggactcggttggttcaggcaaccac
attcccaactccccggtgtctgagtctatcctctgcacccctccaaatgtgacatatgca
tctgtcattttcaaggactacaaacaaagttcctctactctgtga
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