Silurus meridionalis (southern catfish): 124390769
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Entry
124390769 CDS
T08004
Symbol
rgmd
Name
(RefSeq) LOW QUALITY PROTEIN: RGM domain family, member D
KO
K23096
repulsive guidance molecule A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124390769 (rgmd)
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Motif
Pfam:
RGM_N
RGM_C
C8-3_MUC4
Motif
Other DBs
NCBI-GeneID:
124390769
NCBI-ProteinID:
XP_046712722
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Position
9:1273075..1278753
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AA seq
423 aa
AA seq
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MGRSGTLSSAKLQLSNRISLLIFSLSLILQPALCQSCRIQRCNAEYVSSLSPATGHQEDT
ASDVDYCTALRAYSLCTKRTARGCRGDLVFHSAVFRIKELFVQHNCSSEGPTASVKAPST
SRPTAVDTCDFESRALASGPAGARKKKYAHCGLFGDPHLRTFKDEFQTCRVEGAWPLIHN
RYLSVQVTNVPVVEGSSATATNKITVIFKAYRDCTEQKVYQATTEDVPSAFQDGTRSGGH
TDSLRITESSGHSGVRQVTINARYLGASIIVRRVGRYLTFAIRVPEEMVEESGGLQLCLH
GCPRSELINAHILGRGQWKVESDGQVHPGRTDLLERXTSRCRETLQVEDVYFQSCVFDVL
TTGDVQFSMAAFAALQDLKALPPSTLEQSAVRTPHVYNGARQSSSSILVIVLLLSLILLK
TPG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggggagaagcggaactctcagctcggctaagctgcagctttctaaccggatttcactt
ctcatattttccctgtccctcatccttcaaccagcactctgtcagtcatgccggatccag
cgctgtaacgcggaatacgtgtcgtcgttgtctcccgccaccggccaccaggaggacacg
gcgtccgatgtggactactgcacggctctgagggcgtactccttgtgcaccaagcgaaca
gcccgtggctgcaggggggacctcgttttccactcggccgtgttccgaatcaaagagctc
ttcgttcagcacaactgctccagcgagggtccgacggcttcggttaaagccccgagcacg
tcccggcccacggcggtggacacgtgcgatttcgagagcagggcgctggcttcaggaccg
gcgggcgcaagaaagaaaaagtacgcgcactgcgggctattcggcgaccctcacctgcgc
acgtttaaagacgagtttcagacgtgcagggtggaaggcgcgtggccgctcattcacaat
cgctacctctccgttcaggtcactaacgttccagtcgtggagggatcgagcgccacggca
accaacaagataacggttatattcaaagcgtaccgcgactgcactgagcagaaggtgtac
caggccaccacagaggacgttccctccgccttccaggacggcacacgcagcgggggccac
acggacagcctgcgcatcaccgagagcagcggacacagtggcgtgcgccaggtcaccatc
aacgcccgctacttgggcgcctccattattgtgcgtcgggtcggccgctacctcaccttt
gccatccgcgttcccgaagagatggtggaggaaagtggtggcctacagctctgcctacat
ggctgcccacgcagcgagctcatcaacgctcacatcctgggccgagggcagtggaaggta
gagagcgacggacaggtgcatccgggtcgcaccgacctgctcgagcgcnncacctccaga
tgcagggagactctgcaggtcgaagacgtttacttccagtcgtgcgtctttgacgtcctc
acaacaggagacgtgcagttctccatggcggcgttcgcagcgctgcaggacctaaaggct
cttcctcccagcactctggagcagagcgcagtcaggactccgcacgtttataacggagca
agacagagctcttcgtcaatcctcgtcatcgtcctgctcctttcgctcatcctgctgaag
accccgggctag
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