Silurus meridionalis (southern catfish): 124390930
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Entry
124390930 CDS
T08004
Symbol
ap3d1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-3 complex subunit delta-1
KO
K12396
AP-3 complex subunit delta
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
124390930 (ap3d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390930 (ap3d1)
Membrane trafficking [BR:
smeo04131
]
Endosome - Lysosome transport
Others
AP-3 complex
124390930 (ap3d1)
Endosome - Golgi transport
124390930 (ap3d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
RTP1_C1
RasGEF_N_2
Vac14_Fab1_bd
SR-25
CEP104-like_TOG
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
124390930
NCBI-ProteinID:
XP_046712999
LinkDB
All DBs
Position
9:1786273..1821825
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AA seq
1252 aa
AA seq
DB search
MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRA
LDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYITNFEWYIS
ILVELTRLEGTRHGHIIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGNTQRNGICE
VLYAAAWICGEFSEHLEDPMQTLEAMLRPKVATLPGHIQAVYVQNAAKLFATLLQKHEGT
EDSQVAQEASQLLIERLPLFVQSANLEVQERASCILQLVKYIQKLQQKDVEVAEEVSALF
AGELNPVAPKAQKKVPVPEGLDLDAWINEPPSESESEDEKPKSIFAKEEPKHSRPRHTEV
DEKELARRREVRKQEQANNPFYIKSXPSAQKVYQDMPGVEHIPVVQIDLSVPLKVPGMPM
SDQYLKLEEERRLKEKVDKKKREKKKKKEKRGKGKRADSGPESEEDITPAQQVDIMTEEM
PENALPSDDDDKDPNDPHKALDIDLDKPLADTEKLPVRTHRPEFVKSPGTDEDGESIRQE
YKKRSSKEKKEKKKDKDKERKKSKEEEKKKKKKKRRNDVEEEPLEAHSENPVQSEETSVA
VTPPASASAEASDLDFWLSSAPVPPTAKEATVPTPAAAPETTVTAAPDSESDEPKDEEPE
EKSSKHKKKKVKKEKEEKKKKKRHHHHHHHHHSEGDGRDSVQNGTMEEEEEEEPLPPMSN
YCLLAENTYIKMVYDIQGNLQDGSQVVVSIIFENKSNSFLKSMEFNVLDSLNSKLQRPDD
AGPHDGLVVPFQLPPGVSNEARFVFSVQSIIMPQKLKGTLTFIVKSEDSSTHEKLDFKLH
FTCTSYLITTPCYSDAYAKLLESGDLHSSSLKLEGVNMPFHHLLARICFHHHFSVVERID
SCASMYSRSIQGHHVCLLVKSADQTVSIDAKCDESSLLGNVLEEIKQTFSQC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaagatcgtaaaaggaagcatcgatcggatgtttgataaaaaccttcaggat
ttagtacgtggcattaggaaccacaaggaggatgaggccaaatacatctccacatgcatc
gacgagatcaagcaggaactcaaacaggacaacatcgctgtcaaagccaatgcagtgtgc
aagctcacctatttgcagatgcttggatatgatgtcagctgggctgcgttcaacatcgtt
gaggtgatgagctcttctaagttcacctttaagcgaatcggatacctggcagcctcacag
tgctttcatgaaggcactgatgtcatcatgctgacaaccaatcagattcgcaaggatctc
agcagtcctaatcagtacgacactggcgtggctctgaccggcctctcctgctttgtgacc
cctgacctggcccgtgacctggcaaacgacattatgactttgatgtcccacacgaagccg
tacatcaggaagaaggctgtgctcatcatgtataaagtgttcctgaagtaccccgagtcc
ctgcgtcctgccttcccccgtctgaaagagaaactggaggaccctgacccaggtgtgcag
tcagcagcagttaacgtcatctgtgagctggccagaagaaacccgaagaactacctgtcc
ctcgccccccttttcttcaagcttatgacttcctccaccaacaactgggtcctcatcaag
ataatcaaactgtttggtgccctcacccctctggagcctcgtctcgggaagaagctgatt
gagcccttaactaacctcatccacagtacctcggccatgtcactgctgtatgaatgtgtg
aacacagtgatcgcagtgttgatttctctctcctctgggatgcccaaccacagtgctagc
attcagctctgtgtgcagaaactgcgaatcctgatcgaagactcggaccagaacttgaag
tacttgggtctcctggccatgtccaagatccttaagacgcacccgaagtcagtgcagtca
cacaaagacctgatcctgcagtgcctggatgacaaggacgagtccatccgactgagggct
ctggatcttctatatggcatggtctctaagaagaacctgatggagattgtgaagaagcta
atgttgcacgtcgataaggctgaaggcaccacatacagggacgagctgcttaccaagatt
attgacatttgcagccagagcaactaccagtacatcactaactttgagtggtacattagc
attctggtggaactaacgcggctcgaaggcacccggcatggtcatatcatcgcctcccag
atgctggacgtggccatccgtgtgaaggccatccgagcgttcgccgtggctcagatggcc
acgctgttagacaacgcgcacctgctgacaggcaacacgcaacgcaacggcatctgcgag
gtcctctatgccgccgcgtggatctgtggggaattctcagagcacttggaggaccccatg
cagactctggaggccatgttgcgccccaaagtggcaaccctgccaggccacatccaggcc
gtgtatgtgcagaatgctgcgaaactttttgcgacgttgctgcaaaaacacgaggggaca
gaagacagccaggttgctcaggaggccagccaactgctcatagagagactgcctctattc
gtccagagcgctaatctggaagtgcaggagagggcgtcctgcattctacagctggtgaaa
tacatccagaagctgcagcagaaggatgtggaagtagctgaggaagtatctgcactgttt
gcaggagaactcaaccctgtagctcctaaagctcagaagaaagtgcctgtgcctgaagga
ctggatctggatgcctggatcaatgaacctccatctgagagcgagtctgaggatgagaag
cccaagtctatctttgctaaagaggagcccaagcactctcgacctcgccataccgaagtg
gatgagaaggagcttgcaaggagacgggaagttcggaagcaggaacaagccaacaacccc
ttctacattaaatccnntccctctgctcagaaggtgtatcaggacatgccaggtgttgag
cacattccagtggtacagatcgacctcagcgtgccactcaaagtcccggggatgcccatg
tcggaccagtacctgaagctggaggaggagcgtcggctgaaggaaaaggtggataagaag
aagagggagaaaaagaagaagaaagagaagcgtgggaaggggaagagagctgactcaggc
cccgagagtgaagaagatatcacacctgctcagcaggtggacatcatgactgaagagatg
ccggagaacgccttaccgagtgacgatgatgacaaagaccctaatgatccacacaaagcc
ctggacattgacttggacaagcccctggctgatactgagaagctgccagtgaggacacac
cgccctgagttcgttaagagccctgggacagatgaggatggagagagcatccgacaggag
tataagaagaggagcagcaaggaaaagaaagagaagaagaaggacaaggataaggagaga
aagaagagcaaagaggaggagaagaagaaaaagaagaagaaacgcagaaatgatgtcgag
gaagagccactggaggctcactcagaaaatccagtgcaatcagaagagaccagtgtggcg
gtgactccacccgcctcagcgtctgccgaggcctccgatttggatttctggctctctagt
gctcctgttcccccaactgccaaggaggcaactgttccaacacctgctgcagcccctgag
accaccgtcaccgcagccccagattctgaatcggatgagcccaaagatgaagaacccgaa
gagaagtcgtccaaacataagaagaaaaaggtgaagaaagagaaggaggagaagaagaag
aaaaagaggcatcaccatcaccaccatcaccaccacagtgaaggagacgggagagattct
gtacagaacggcaccatggaggaggaggaggaggaggagcctctaccgcccatgtccaac
tactgtctcctggctgaaaacacttacatcaaaatggtgtacgatattcaggggaatttg
caggatggcagtcaggtcgtggtgtccatcatctttgagaataagagcaacagtttcctg
aagtccatggaatttaacgttttggactccctcaactccaaactgcagcggcccgatgat
gccggaccacatgatgggctcgtcgtacccttccagttgccaccaggggtatcaaacgag
gctcgcttcgtgttctccgtgcagagcatcatcatgcctcagaaactgaaaggaaccctg
accttcatagtgaagtcagaggattcctccactcatgagaaactggacttcaaactgcac
tttacctgcacatcatacctaatcacaactccatgctacagtgatgcgtacgccaagctg
ctggagtccggggacctacatagcagctctctgaagctggagggagtcaacatgcctttc
catcacctgttggctagaatttgcttccatcaccacttctctgttgtggagaggatcgat
tcctgtgcctccatgtatagcaggtcaatccagggtcaccatgtctgtttgctggtcaag
tccgctgatcagacggtgtccatcgacgctaaatgtgatgagtcatcactgctggggaac
gtgctggaagagataaagcagaccttctcgcaatgctga
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