Silurus meridionalis (southern catfish): 124390965
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Entry
124390965 CDS
T08004
Symbol
mcf2l2
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124390965 (mcf2l2)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124390965 (mcf2l2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_9
SH3_1
PH_10
GlutR_dimer
SH3_2
Spectrin
DUF7799
Motif
Other DBs
NCBI-GeneID:
124390965
NCBI-ProteinID:
XP_046713072
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All DBs
Position
9:complement(20209720..20280960)
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AA seq
1250 aa
AA seq
DB search
MLCWLKEEEMSMQEFQERVGCVITHVDEIMQQEIRPLLAVDIIEQLHRQFAMLSGGRGKD
GAPIITFPEFSGFNDLSDEDFINVVTYLTSIPSLDAASIGFIIIIDRRRDKWTSVKASLA
RIAGAFPGNLQLVLVLRPSRFLQRTIADIGIRLHRDDFKMKVPIVMLNSLSDLHGYVDSG
QLTRELGGSLHYCHSQWIHHRTAIENFAVTVKTTAQMLQRFGTDLAETELPNDVQCTKDL
LTAHTDKHDKLQEELKLAMKQGTTLLSCIKDQASKAENHKLNPDEVENLTTVERLLAQLD
ETENAFEQFWSKHHLKLEQCLQLRHFEQDFREVKLSLDSLMDTLLALSDTGDGADRMEHL
LKELKSLQDRAQESLEKAQLHALHGDQLIQSNHYAVDSIRPKCVELRRICDDFSNEAKKK
YDVLSKSLEIHTWLEKVRHWCENGVYLLASQAVDKCQSQDGAEAALHDIERYMETAKEQQ
LSQLKDLYNQHEMALSDLMKINVQNALKRLEEVHEMFEKRHISLKRLSAKQTRPVQPVAP
RPESSPKRPPPKSTRPPGSVPNRRGPENSSTKHNADAELARKKNIRKTKGGIKIEVMHEE
SQGGSSHVLVSSETEESLSSRRRHIMNELIETERLYVEELQSIIEGYAAALDNSEMVHLI
PAVLENKKDVLFGNLGDIYTFHNRTFLKELENCVEKPELVGTCFLKRKEELQIYEKYCQN
KPRSEALWRQCGDSLFFQECQKRLDHKLSLDAYLLKPVQRITKYQLLLKEMLKCSKNSEG
TAELEEALATMLDIIKSVNDSMHQIAITGFEGNLNDLGKLLMQGSFNVWTDHKKGHNKVK
DLARFKPMQRHLFLYNKMILFCKKREENADAHEKSPSYGFKHSLKMSAVGITENVKGDAK
KFEIWYNGREEVYIIQASSMDIKNTWVSEIRKVLTGQLEACKEASQLHQRITENIYHAPM
RNIRKVALRQSDSSSPETGYKRTDGGPNMRQKRAGAVSTLSSDPSSALARKRFTLQGLSN
RRSLPSEPTPKEAEVPRRFSLASSLSAPSTTRTKGPLSATIKSKRHQIKSDPTPFGYEDS
LREALPADRKNKGTASTKPAVPRSTSQPGWSQRRLPSMDTEDFETIPSSAEELSNSSDGE
DESGNKNEGRNRFQVQLTYQSRAPQEMSLEPGDLVQFLEEVENGHWLVKNLNTLKTGLVP
PSILQSTAGRVDIYSNTDIFSDLCTAALTDTEEAEEGAGLPTVQENRFAC
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgctctgctggctgaaggaggaagagatgtccatgcaggagttccaggagcgcgtgggc
tgcgttatcacccatgttgatgagatcatgcaacaggagataaggcctttgctggctgtg
gacatcatcgaacagcttcacaggcagtttgcaatgctgtcaggtggacgagggaaggat
ggcgccccgatcattactttcccagaattttctggcttcaatgatctgtctgatgaagac
ttcattaatgtagtcacatatctcaccagtattcccagtctggatgctgctagcatcggc
tttatcattatcatagaccgtcggcgggacaaatggacttcggtgaaggcctcgctggca
cgaatagcgggggcatttccaggcaacctgcagctagttctggtcctgagaccctcacga
tttctccagaggaccatcgctgacatcggcatccggttacaccgcgatgactttaaaatg
aaggtaccgattgtcatgctaaactccctgtcagatctgcacggctatgtggatagtggc
cagctgacacgtgaattaggtggaagcctgcactactgtcacagtcaatggattcaccat
cgcacagccatcgaaaacttcgctgtgacggtcaagaccacagcccaaatgcttcagaga
tttggaacggacttggcagaaaccgagcttcccaacgatgtgcagtgcaccaaagatctc
ctgacagctcatacagacaaacatgacaagctacaggaggaactgaagttggctatgaaa
caagggaccacgttgctttcgtgtatcaaagatcaggccagtaaagccgagaaccacaaa
ctaaatccagacgaagtggaaaatctaaccacagtcgaaaggttgttagctcagctggat
gagacagaaaatgcgtttgaacagttctggtccaaacatcacttaaagttagagcagtgt
ttgcagttaagacattttgagcaggactttagagaggtgaaactgtctctggacagcctg
atggacactttgctggcactttccgacaccggagacggggctgatcgcatggagcatctg
ctgaaagagctgaagagcctgcaggacagagctcaggaatctttggagaaggcgcagctc
catgccctgcacggcgaccagctaatccagagtaaccactacgcggtggactcgatccgg
cccaagtgcgtggaactgcggcgcatctgtgacgacttcagcaacgaagccaaaaaaaaa
tacgacgttctgtcaaaatcgcttgagatccacacgtggctagagaaggtgagacactgg
tgcgagaatggggtgtacctgctggcctctcaggctgtggataagtgccagtctcaggac
ggggctgaagcggctctgcacgacattgagaggtacatggagacggctaaagagcagcag
ctcagtcaactcaaagacctctacaaccaacatgagatggctctctctgatctcatgaag
atcaatgttcagaatgcgctgaaaagactggaagaagtccacgagatgttcgagaaaaga
cacatcagtctaaagaggctgtctgccaagcaaactagacctgtgcaaccggtagctcca
cgtcctgaatcttctccaaagcgccctccacctaaaagcacgcggcctccaggctctgta
ccaaaccgcagaggtccagaaaatagttccaccaagcataatgctgacgccgagctggca
aggaagaaaaacatacgcaagactaaaggaggcatcaagatcgaagttatgcacgaggaa
agtcaggggggttccagccacgtgcttgtgagcagcgagacggaggagagtctctccagc
aggcggagacacataatgaatgagctgattgagacggagagactctatgtggaggagctc
caaagtataatcgagggttacgctgcagcactggataattccgaaatggtgcatctaata
ccggctgttttggaaaacaagaaggatgtgctgtttggcaatcttggggacatctacacc
tttcataacaggacatttctcaaagagctggaaaattgcgtggagaagccggagttagtg
ggcacatgcttcttgaaaagaaaagaagaactgcagatctatgagaaatactgtcaaaat
aaacctcggtctgaggctctctggaggcagtgtggggacagtctgttctttcaggaatgc
caaaaaaggttggaccacaagctctccttagacgcgtacctgctaaagccagttcagaga
atcaccaagtaccagttactgctcaaggaaatgctgaaatgcagcaagaactcggaaggc
acggcggaactggaggaagctctggccaccatgttggatatcataaaatctgttaatgat
tcaatgcatcagattgccatcactgggtttgagggtaatttgaatgacctgggcaagctg
ctcatgcaaggctctttcaacgtgtggacagaccacaagaaagggcacaacaaagtcaag
gacttggcacgcttcaagcccatgcagagacaccttttcttgtacaacaagatgattttg
ttctgcaagaagcgcgaggagaacgcagacgcccatgagaaatccccgtcctacggtttc
aaacattctctaaagatgagtgctgttggaattactgagaatgtaaaaggagacgccaag
aagtttgaaatctggtacaatgggagagaggaagtctacatcattcaggcctcctccatg
gacataaagaacacgtgggtgtccgagatcaggaaagtactgacgggccaactggaggcg
tgcaaagaggcaagtcagctccatcaaagaatcaccgaaaacatttaccacgctcccatg
aggaacattcgcaaagtggccctgaggcagtcggactcctcgagcccagagacaggctac
aagcgcaccgacggcggccccaacatgaggcagaaacgagctggcgccgtgtccacgctt
agctcagacccgtcctcggctctggctagaaagcgcttcaccctacaaggcctgtccaat
cgcaggtccctgccatcagagccgacgcctaaggaggccgaagtccctcgccgcttctct
ctagcctcctccctcagcgcgccctctaccacgcgcactaaaggtcctctttccgcgacc
attaaaagcaagagacaccagattaagagtgacccgactccgttcggttatgaagattca
ttgcgagaagctcttcccgctgacagaaaaaacaaaggtacagcaagtaccaagcctgct
gtgcctaggtccacgtctcaaccaggatggagccagcgccgtttaccttcaatggacaca
gaggactttgagaccatcccatccagcgctgaagaactttcgaattcatcagacggagag
gacgagagcggtaacaaaaacgaggggcgcaatcgctttcaggtgcagctgacgtaccag
tcacgagcgccacaggagatgtcgctggaacctggagatttagtccagttcctagaagag
gttgagaatggccactggctagtcaagaacctaaatacactgaagacagggctggttcca
cccagtatcctgcagtctacagcaggacgagtggacatttacagtaacactgacatcttc
agcgacctgtgtacggcggccctcacagacacagaggaagcagaggagggcgctggactg
ccaacagtccaggagaacagatttgcatgttga
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integrated database retrieval system
