Silurus meridionalis (southern catfish): 124390999
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Entry
124390999 CDS
T08004
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124390999 (sox2)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124390999 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124390999
NCBI-ProteinID:
XP_046713169
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All DBs
Position
9:6638202..6640449
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AA seq
331 aa
AA seq
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MYNMMETELKPNPGGNNTGTGNTGGGTPGQKNSPERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDK
YALPGGLLAPGGGGGGNLGGNGMSAGVGSGLGGLGVNLGVNQRMDAYAHMNGCWSNGGYG
MMQEQLGYAAAASPMQQQQQHHVHRYDMSALQPYGSMTSAQTYMNGSPTYSMSSYPQLSS
MGSAVKSEASSSPPAVTSASHVRAAAAPASAHAPPPPSCQTGDLRDMISMYLPGAEVAEQ
TGQSRLHLSQHYQSAPVHATTINGTIPLSHM
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagaccgagttgaaacccaatcccgggggtaataacaccggcacc
gggaacaccggaggcggcacaccgggacagaagaacagtccggagcgcgtaaagaggccc
atgaacgcgttcatggtgtggtcccgcggccagcggcgaaaaatggcccaagagaacccg
aagatgcacaactctgagatcagtaagaggctgggcgccgagtggaagctgctgtccgag
tctgagaagcggccgttcatcgacgaggccaagcggttgcgcgctctgcacatgaaggag
cacccggactacaagtaccggccgcggcggaagaccaagacgctcatgaagaaggacaag
tacgcgctgcccggcgggctcctggcaccgggcggcggtggcggtggaaacctgggtggt
aacggcatgagcgccggcgtaggctcgggcctcggcggcctcggagtcaaccttggggtc
aaccagaggatggacgcgtacgcgcatatgaacggctgctggagcaacgggggctacggc
atgatgcaggagcagctgggctacgcagcggcggcgagtcccatgcagcagcagcagcag
caccacgtacaccgctatgacatgagcgcgctgcagccgtacggctccatgacgagcgcg
cagacctacatgaacggctcgcccacgtatagcatgtcgtcctacccgcagctcagctca
atgggctcggcggtgaagtccgaggccagctcgagtccacccgccgtcacgtccgcgtcg
cacgtcagagccgccgccgcgcccgcaagcgcacacgcaccgccaccgccctcgtgccaa
accggggacctgcgggacatgatcagcatgtatctgcccggggcggaagtggccgagcag
acgggccaaagcagactgcacctgtcgcaacactaccagagcgcacctgtgcacgcaacc
acgattaacggcaccatcccgttatcgcacatgtaa
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