KEGG   Silurus meridionalis (southern catfish): 124391050
Entry
124391050         CDS       T08004                                 
Symbol
strn
Name
(RefSeq) striatin isoform X1
  KO
K17608  striatin 1/3/4
Organism
smeo  Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:smeo01009]
    124391050 (strn)
Protein phosphatases and associated proteins [BR:smeo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     124391050 (strn)
SSDB
Motif
Pfam: WD40 Striatin Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_ACSF4 SOGA1-2-like_CC
Other DBs
NCBI-GeneID: 124391050
NCBI-ProteinID: XP_046713312
LinkDB
Position
9:11258850..11313121
AA seq 786 aa
MDEQAGPGVFFNNNNNSGLAVGAKAVQQTGDGGGEAVRAQYNIPGILHFLQHEWARFEVE
RAQWDVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKLKYGTELL
QGDMKAPSYDSDDGNENEALPEPPNSQLSWKQGRQLLRQYLQEVGYTDTILDVKSQRVKA
LLGLTGDAVERAEERRTELMVNGTEPSSLKESTTNMMGKPEMSDSATVLEAFKFIESAAA
EFSDEDEDEDSDGREKTIIDLATMMRKKASPSPSSSSADLSDDPDTEEALKGFDFLASSE
DMEGSPESPATGDMADWEKEPNAMTEAWEVDQSLISKLKEQYRKERKGKKGVKRPNRSKL
QDMLANLRDAEDLPSMQPPVAPPARPSIPRLNEHDLGRADEVEALTFPPSTGKSFIMGAD
EALENELGLGELAGLTVANEAESLAYDITNNKDALRKTWNPKFTLRSHFDSIRSLAFHPQ
EPVLVTASEDHTLKMWNLQKTAPAKKCAALDVEPIYTFRAHRGAVLCVVMSSNGEQCFSG
GVDGTIQSWNTPNPNIDPYDSYEPSVMRGVLSDHTDAVWGLVYSSAHQRLLSCSADGTVR
LWDAADSSPALAVFNEDMELGIPSSVDLVCSEPAHMVTAFSNGRTGIFNMETRQLVLELE
SQNAGEPDAPRQINKVLSHPTLPITITAQEDRHIRFFDNNTGKLIHSMVAHLDAVTSLAV
DPNGLYLMSGSHDCSIRLWNMESKTCIQEFTAHRKKFDESINDVAFHPTKCYIGSAGADA
LAKVFV
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggacgaacaggcgggccccggtgtgttttttaataataacaataactccggtttggcc
gtcggagcaaaagcggtccagcaaacgggcgacggaggcggagaagcggtgagggcgcag
tataacatcccggggatcctgcactttctgcagcacgaatgggcccgtttcgaggtagag
cgagctcagtgggacgtggagcgtgctgaattacaggctcagattgcctttctgcagggt
gagcggaaaggtcaggaaaacctgaagaaggatttggtgaggaggatcaagatgctggag
tatgctctgaagcaggaaagggcaaaataccacaagctgaagtatgggactgaactcctg
cagggagacatgaaagcaccgagctatgattcagatgatggcaatgagaatgaggctctt
ccagaaccacctaacagccagctaagctggaaacaaggaagacagcttctgaggcagtac
ctccaggaagtgggctacacggacactatcctggatgtgaaatctcagagggtgaaggcg
ttactggggctaactggagacgcagtggagcgagctgaagaacgcaggacagagctcatg
gtgaacggcacggaaccttcatctctgaaggaaagcaccaccaacatgatggggaaacca
gagatgtctgactcagcgacagtactggaggccttcaagttcattgaaagtgcagctgca
gagttcagtgacgaggatgaggatgaagacagtgacggaagggaaaagactatcattgat
ttggcaacaatgatgaggaagaaggcttccccatcgccttcctcttcctcagctgatctg
agtgatgacccggacactgaggaggcactgaaggggtttgacttcttggccagcagtgag
gacatggagggttcaccagaatctcctgccaccggagacatggctgattgggagaaggag
ccgaacgccatgaccgaggcctgggaagtggaccagagcctgatctccaaactcaaggag
cagtacaggaaggagcgcaagggcaaaaagggggtgaagaggccgaacaggtctaagcta
caggacatgttggctaatctgagagatgcagaggatcttccatccatgcagccccctgtg
gctccccctgccagacccagcataccacgactcaacgagcatgatcttggccgtgctgat
gaagtggaagcacttacgttccctccatccactggtaaatcttttataatgggagcggat
gaggctctggagaatgagctgggactgggagagttggctggactcactgttgcaaacgaa
gctgagagtctggcctacgatatcaccaacaacaaagatgctctgaggaagacctggaac
cctaagttcaccctgaggagccatttcgactccatccgcagtctggcgttccaccctcaa
gagccggtgttggttacagcttctgaggatcatacactaaagatgtggaacctgcagaaa
acagctcctgctaaaaagtgtgcagcccttgatgtagagcccatttacacattccgagct
caccggggtgcagtattgtgtgtggtcatgagcagtaacggagagcagtgcttcagcgga
ggagtggacggaaccattcagagctggaacactccgaatcccaatattgacccctatgac
tcatatgagccgtctgtgatgaggggggtgctgagtgatcacactgatgcagtgtggggt
ttagtctacagctcagcccaccagcggcttctatcctgttctgcagatgggacagtgcga
ctttgggatgctgcagacagctcacccgcccttgccgtctttaacgaggacatggagttg
ggcattccttcttctgtggatctggtgtgcagtgagccagctcacatggtgacagccttt
agcaacggcagaacaggcatcttcaacatggagacacggcagctggtgctggagctggag
tctcagaatgcaggagagcctgacgccccacgtcagatcaacaaagtgctgagccacccg
acgctgcccatcaccatcacggcacaggaggaccgtcacatccgtttctttgacaacaac
acaggaaaacttattcactccatggtggctcatctggatgctgtgaccagcttagcagtg
gatcccaatggcctctatttgatgtctggcagtcacgactgctccattcgcctgtggaac
atggagagcaagacctgcattcaggagttcacggctcacaggaagaagtttgacgagtcg
atcaacgatgtggcattccatcccaccaagtgctacatcggcagtgctggagcggacgcc
ctcgccaaagtcttcgtatga

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