Silurus meridionalis (southern catfish): 124391059
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Entry
124391059 CDS
T08004
Symbol
gtpbp3
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
smeo03016
]
124391059 (gtpbp3)
Transfer RNA biogenesis [BR:
smeo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
124391059 (gtpbp3)
Prokaryotic type
Methyltransferases
124391059 (gtpbp3)
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
SRPRB
Dynamin_N
cobW
Motif
Other DBs
NCBI-GeneID:
124391059
NCBI-ProteinID:
XP_046713325
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All DBs
Position
9:complement(18163881..18183137)
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AA seq
518 aa
AA seq
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MTPAGCWRIIGLFKNVVRRRVYLRCPVVSGQAWLCRPFGSCLVTGFEDTIFALSSGRGRC
GVAVVRVSGPDAARALRALTSLKRAPNPRTALLRNITHPTSQELLDRGLVLWFPGPRSFT
GEDSAEFHIHGGPAVINGVLQALGSLPGLRPAEAGEFTRRAFHAGKLDLTEVEGLGDLIH
AETEAQRRQALRQMAGDLGRLYNDWSQQLKHCLAHLEAFIDFSEDELIEDGVLNQVDIAA
SKLQVEIQKHLSDERRGERLRNGVQMVIAGSTNVGKSSLFNLLCQRPAAIVSPIPGTTRD
VVETPLDIGGFPVLLSDTAGLRETDDFVEQEGVQRALKRVEVADLTLVVLDSTQLPQEPQ
MVPDFLKDYLNNVLPKETDQDHMPQHLLILNKSDLLPNEHLSIIRKALSDVLPVAPVSIL
SCSTREGLADFLKVLQERVKTMCADPLVGSPSLTQTRHRTNLQKSVEALSQYHKYRDVDL
ALAAEGLRLGLSCLGRITGKIGTEEILDVIFRDFCIGK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgccggctgctggaggattattggcctttttaaaaacgttgtcaggcgacga
gtgtacctcaggtgtcctgtcgtctctggtcaggcttggctgtgcagaccgttcggcagc
tgtcttgtcaccggtttcgaggacacaattttcgctttgtcttcaggacgaggtcgttgt
ggggtagccgtcgtgcgcgtgagcggaccggatgctgcccgagctctgcgcgcactgacc
agcctgaagcgcgcgccgaacccccgcactgcgctcctccgcaacatcacccaccccaca
tctcaggagctgctggaccggggccttgttctgtggttcccaggtcctcgcagtttcaca
ggagaagacagtgctgagtttcacatacatggaggacctgctgtcattaatggtgtttta
caagcccttgggagtctgcccgggctgcggcctgcagaggcaggggagtttacccgacgt
gcgttccatgctggaaagttggatttgactgaagtagaggggttgggggatttaatccat
gcagagactgaagctcagagaagacaagcactcaggcagatggcgggggacctcgggcgc
ctatacaacgactggagtcagcagctcaaacattgtttagcacacctggaagctttcatt
gacttcagtgaggatgagctcatagaggatggagtcctaaatcaagtggacattgcagca
tcgaagctacaagtggaaatacagaagcatctttctgatgagcgacgaggcgaacgactg
cgcaatggtgtacagatggtcatagccggatcaaccaatgtgggcaagagcagccttttc
aatttactgtgccaacgtcctgcagctattgtgtctccgataccagggaccacccgtgac
gttgtagagacgccactggacatcggaggttttccggttctgttgagtgacactgcaggt
ttaagggagacggacgattttgtggagcaagagggtgtccagcgtgccctaaaaagggtg
gaagtggcagatctgactctagtggtcctcgactcaacacagcttcctcaggagcctcag
atggtgccagatttcctgaaagactacctcaacaatgtgctgccaaaagagactgatcag
gatcacatgccgcagcatctcctgatccttaacaaaagtgatctactgcctaatgaacat
cttagcatcatccggaaagcccttagtgacgtgttacctgtggctccagtcagtatttta
tcatgcagtaccagagaagggctagctgatttcttaaaagtgttgcaggagagagttaag
acaatgtgtgcagatccactggtcggtagtccaagtctaacgcaaactcgccatcggact
aacctgcaaaagagtgttgaggccttgagtcaatatcataagtacagagatgtggacctg
gcactggcagcagaaggactgcgcttaggtcttagctgcttgggtagaatcactggcaag
attggcactgaagagattttggatgtgatttttagagatttttgcattgggaaataa
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