Silurus meridionalis (southern catfish): 124391103
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Entry
124391103 CDS
T08004
Symbol
thap11
Name
(RefSeq) THAP domain-containing protein 11
KO
K23211
THAP domain-containing protein 11
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
124391103 (thap11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124391103 (thap11)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124391103 (thap11)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2CysHis zinc factors
124391103 (thap11)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Gene silencing
Transposable elements
124391103 (thap11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THAP
RAP1
Tmemb_cc2
CARDB
DUF641
DUF11
Motif
Other DBs
NCBI-GeneID:
124391103
NCBI-ProteinID:
XP_046713408
LinkDB
All DBs
Position
9:17244812..17247964
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AA seq
271 aa
AA seq
DB search
MPGFTCCVPGCYNNSHRDRELRFYTFPKDPTQREIWLKNISRAGVSGCFSTFQPTTGHRV
CSVHFPGGRKTYTIRVPTLFPLRGVNERRSRRGRGRKVYAASAPAPILTSVGAIHSEAQG
ETEFVVQIGQNGQYLSTASAVSSSSSASSTSGSSSLSLTAATVTADGSCSVPSLKSEEAT
EVVVTVVPDQPGPYLALCGEEHSYSLTTGTTSAELLRKLNEQRDIIALMEVKMKEMKNTI
RQLRVNEARLQEELRERDRVLSGIGAVRKKV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcttcacgtgctgcgtgcctgggtgctataataactcgcaccgggaccgcgag
ctccggttctacaccttcccgaaagacccgactcagcgggagatctggctgaagaacatc
tcccgggccggagtgagcggctgcttcagcaccttccagcccactaccggacaccgcgtg
tgcagcgtgcacttccccgggggcaggaagacctacacgatccgagttccgacgctcttc
ccgttacgcggcgtgaacgagaggagaagtcggcgcggcaggggcaggaaggtgtacgct
gcgtctgcgcctgcgcccattctcaccagcgtcggcgcaatccacagcgaggcacagggc
gagaccgagttcgtggtgcagatcggacagaacggccagtatctctcaaccgcttctgcc
gtgtcctcatcctcatccgcatcgtcgacctccggatcctcatcgttatcacttacagca
gccacagtaacagcggacggctcgtgctcagtgccgtcgctcaagtccgaggaagccacc
gaggtggtggtgacggtggtaccagatcaacccggtccgtacctggcgctgtgcggagag
gagcactcatactccctgaccaccggcacgacatcagccgagctcctgaggaaactcaac
gagcagcgcgacatcatcgccctcatggaggtgaagatgaaggagatgaagaacacaatc
cgccagctgcgcgtcaacgaagcgcgtctgcaggaggagctccgcgagcgcgaccgtgtg
ctctccggtatcggtgcggttcggaagaaagtctga
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