Silurus meridionalis (southern catfish): 124391105
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Entry
124391105 CDS
T08004
Symbol
spoplb
Name
(RefSeq) speckle-type POZ protein-like B isoform X1
KO
K10523
speckle-type POZ protein
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124391105 (spoplb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124391105 (spoplb)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124391105 (spoplb)
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
Motif
Other DBs
NCBI-GeneID:
124391105
NCBI-ProteinID:
XP_046713410
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Position
9:25473674..25484405
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AA seq
415 aa
AA seq
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MSNLFLFEHKVELHKGRERIKLAMSRVPTPPPPGEMTSGPVAESWCYTQVKVVKFSYMWT
INNFSFCREEMGEVLKSSTFSSGPNDKMKWCLRVNPKGLDDESKDYLSLYLLLVNCPKSE
VRAKFKFSLLNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTL
FCEVSVVQDSVNISGQSNMNMLKVPECQLADDLGSLWEGSRFTDCSLFVGGQEFKAHKSI
LAARSPVFNAMFEHKMEESKKNRVDISDVEPDVFREMMVFIYTDKAPNLDKMADHLLAAA
DKYALERLKVMCEEALCNSLSVENVADILILADLHSAEQLKAQAIDFINRCSVLRQLGCK
DGKNWNSNHAADIMETAGWKAMIQSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgttcctctttgaacacaaggtcgagcttcataagggacgcgagaggata
aagctggccatgtcacgggtcccgaccccgcctcctccaggggagatgacctcaggacct
gtggcagagagctggtgttacacacaggtcaaagtagtgaagttctcctacatgtggacg
ataaacaacttcagtttctgccgagaggagatgggagaggtgctgaaaagttccacattc
tcttctggacccaacgacaaaatgaaatggtgtttgagagtgaatccgaaagggctcgat
gatgagagtaaagattatttgtccctctacctgctgctcgtaaactgtccgaaaagtgaa
gtgagagcaaagttcaagttctccctgctgaacgccaaaagagaagaaactaaagccatg
gaaagtcaaagagcgtatcgatttgtccagggcaaggattggggcttcaaaaagtttatc
aggcgggacttcttacttgacgaagcgaatggacttctaccagatgacaagcttacactt
ttttgtgaggtgagtgtggtgcaggactctgtgaacatttccggtcaatccaacatgaac
atgctaaaggtgcccgagtgtcagctggctgatgacttgggcagcctgtgggagggatcc
aggttcaccgactgcagcctgtttgtgggaggacaggagtttaaagcacacaaatccatc
ctggcagcgaggtcaccggttttcaatgccatgttcgaacacaaaatggaggagagtaaa
aagaaccgcgtggacatcagcgacgtcgaaccggacgtgtttagagagatgatggtcttt
atctacacagacaaagcgccaaacctggacaaaatggccgatcacctgttagccgcagca
gacaagtacgctctggagagattgaaggtgatgtgcgaggaggctttgtgcaacagtctg
tccgtcgagaatgtggcagacatcctcatcctggcagacctgcacagcgccgaacagctc
aaagcacaagccatagacttcatcaacaggtgcagcgttctcagacaactgggctgtaaa
gatgggaagaactggaatagcaatcatgcagcagacataatggagactgcaggctggaag
gccatgatccagtcccatcctcaccttgtggccgaagccttccgtgccctcgcgtcagcc
cagtgtcctccgttcggcctgcccaggaaaaggcttaaacagtcctga
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