Silurus meridionalis (southern catfish): 124391138
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Entry
124391138 CDS
T08004
Symbol
arhgef18b
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 18
KO
K21066
A-kinase anchor protein 18
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124391138 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124391138 (arhgef18b)
Membrane trafficking [BR:
smeo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124391138 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
PH_13
Atrophin-1
C1_2
Motif
Other DBs
NCBI-GeneID:
124391138
NCBI-ProteinID:
XP_046713474
LinkDB
All DBs
Position
9:complement(6004461..6072500)
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AA seq
1465 aa
AA seq
DB search
MADSLLNHSWPSFSKFWMKRWSFKRASENKPCTRPSAPVSGMRSTSSPSPDSLFSSTTED
QNSCLAESDFLDLSFSLRDSEYFKDLQANTGGECNPSESTPFTLHCESYVDLSVSHRKMN
LLSDPEDQVDSTEGLDKMSVDDLDRENFPILVRSMSTSRRHSSDVPLNPLDLGRRFSLDT
RSIDSDGEHDDQSRSQSSVEEFTTSGETENTKTLQPSTTGRMVYSRSEIVSSDEKFRAER
VSRILETSKEAARVSGEEHDSDENLRSAEGQSHMLMVQKVLHELKLYHWANRRTSTADRK
ENVTWYEFLSIENEEEEEKVERAEKGTKVKRTLSSLKNRMTGSFNKDKGKTREKEQQKER
DREREKEKEKEKERERELKESTCVVSSSCNGHQLVRGFFSSRATCSLCSKTLQRKHGLEC
VNCAVNVHKSCKSLLPECSNSKNKSKDFAQKSQAACSQASREQCFATDGAIRPATGMTIL
PRGASGQQNAHSTTHSISHTSSSSSITGEMDEVDAFRIKRHTDDTISIAPSTAESAIVED
AYYSSVRAELDSMAQDYEVESWSLAVDQHFLKKHSKEVIKRQDVIYELIQTEMHHVRTLK
IMMKVYVCELRETLQLEERRLDCLFPQLESLLDLHSNFLSRLRERRHETLEPGSERNYII
HSVADILIEQFSGELGERMKESYGEFCSHHTEAVNSYKEQLQNKKFQNHIRKINNLTIVR
RLSIPECILLVTQRITKYPXLVERMLQYTEADTEEHKELSRALGLIKETITQVDTWVNLY
EKETRLREIAAKMEPKAFGKIKDGCIFRREDVTQGRRRLLHEGMVNWKAASGRLKDILAV
LLTDVLLLLQDKDQRYVFSAVDGKPSVISLQKLIVREVAHEEKAMFLICASSNEPEMYEI
HTSSKEERNTWIKHIRQAVDSCPHTEERLVTEEDGARQQHFKEIQEHLTVKDAQIRQALT
EKLRLYADLVECAGVLEDTGTRRHLLLRGDVSELLQGEQLLKGAITEVENLQNILVSSSK
GVPQTEENPSPSSLPKRAGTFGGYDSTVSVLQKNGSVKKHSTGAGKSRDRSHRASSDPQL
KEMCASQGVEADNISSPSWNMICSRFPSTEFSDRVLLLSQQLYSLQAVVSQQDSMIELQR
ASLFSVERQRGTDVLLEQEKQRNLEKHREEMAHFQRVQAQQQQEQERWERERARQVKQNE
AEQLRLQEREDACRKLEERLAQERLELQSQRQKYQQDLERLRESIRVVAREQEKLEQQRK
MKKRNTAPITATTYGSDTVQLPMSSSFNGDLLINSGPDSFLQTPSQLRSSTSLSPADYSE
RAELPLPRRESSATMPAKTEVPIHLVSTTNQLHKQGGVQQQIPTKLAMLKSKDKSSKIKG
SQRTESSASVDMKHMLSQKLSSREPESSFKARRSTSPHQQLSLASPPIPDSPIGDKYTPE
PGKAQSLLKSYPLPDDKDKEEVVML
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctctcctaaaccactcctggccttccttctccaagttctggatgaaaaga
tggtctttcaaaagagcttcagaaaataaaccatgtacacgaccaagtgctccggtctca
gggatgagatctacctcctcaccttcacctgacagcttgttcagcagcacaactgaggat
cagaattcctgtttagctgaaagcgactttttggacctgagtttttctctgagagactca
gagtactttaaagacctgcaggccaacactggtggggagtgtaacccttctgagagcacc
ccattcacactgcactgcgaatcgtacgtagatctctccgtgtcccacaggaagatgaac
ctgctttctgatccggaagatcaggtagactcgacagagggtttggacaaaatgagtgtg
gatgatttggacagggaaaattttcccatcctggtcaggtctatgtcgacctcgcggaga
cacagctcggatgtcccactgaatccgcttgacctggggagaaggtttagtttggacacc
agaagtatagacagtgatggggagcatgatgatcagagccggtctcagagctcggtggag
gagttcactacatctggagaaacagagaacaccaaaaccctgcaaccgtccaccacgggg
agaatggtgtattctcgatctgagattgtgtcgtcagatgagaagtttcgagctgagagg
gtctcacgcattctggaaacttctaaagaggcagcccgagtttctggagaggaacatgac
tcagatgagaatttgcgctctgcagaaggccagtctcacatgctgatggtacaaaaagtt
cttcatgagcttaagctgtatcattgggccaatcgcagaacttcaactgctgaccgaaaa
gaaaatgtcacctggtatgaatttctctcaatcgagaatgaggaggaggaggagaaagtg
gagagggcagagaagggcacaaaggtcaagcgcaccctgagctcgctaaagaaccgaatg
actggatccttcaacaaagataagggtaagacccgtgagaaagagcagcagaaagagaga
gacagagagagggaaaaggagaaagagaaggagaaagagagggaaagagagctgaaggag
agcacttgtgtggttagcagcagctgtaatgggcaccagcttgtgcgtggctttttttcg
agccgagccacatgctcactgtgcagcaaaaccctgcagaggaagcatggcctggagtgt
gtcaattgcgctgttaacgttcacaaaagctgtaagagtctcctgcctgagtgcagcaac
agtaagaacaagagtaaagattttgcccagaagagccaagcagcctgtagtcaagcttcg
agggagcagtgcttcgccacagatggagccatccgcccggctacaggaatgaccatcctg
ccacgaggagccagcgggcagcagaacgctcacagcaccactcactcaatcagccacacc
agcagctccagctctattacaggagaaatggatgaagtagacgcgttcagaattaaacgg
cacaccgacgacaccatctccatcgctccatctacagccgaatccgccatcgttgaagat
gcatactacagcagcgtgcgagccgagctggactcgatggctcaggactacgaggtggag
tcgtggagtttggctgtagatcagcatttcttaaagaaacattccaaagaagtgatcaag
agacaggacgtgatttacgagctgatccagacagaaatgcaccacgtgcgcacgctgaag
atcatgatgaaggtgtacgtctgcgagctgcgtgagactctgcagctggaagagcgcaga
ctggactgtttgttcccgcagttggaaagcctgctggatctacactcaaattttctgtct
cgtctcagagagcgacggcatgaaacgctggagccggggagcgaacgcaactacatcatc
catagtgtggcagacatcctcattgagcagttttcaggtgaactcggggagagaatgaag
gagagctacggcgagttctgcagtcaccacaccgaagccgtcaacagctacaaagagcag
ctgcagaacaagaaatttcagaaccatataaggaaaataaacaacttgaccatcgtgcga
cggctcagcattcctgagtgcatcctgctcgtcacgcagcgcatcaccaagtacccgntc
ctggtggagcgcatgctgcagtacacagaagctgacacagaggaacacaaggagttgtca
cgagctctgggcctgatcaaagagaccattacgcaggtggacacttgggtaaatctgtac
gagaaggagacacgcctccgagagatcgctgccaagatggagcccaaagcgttcggcaag
attaaagacggttgcatcttcaggagggaggacgtgacgcagggcaggcggaggctgctg
cacgagggcatggtcaactggaaggccgcctctggcagactgaaggatatcctcgctgtg
ctgctcacagacgttctgctcctcctgcaagacaaggaccagagatacgtcttctctgct
gtggacgggaagccgtcagtcatctctttgcaaaaactgatcgtcagagaggtggcacac
gaggaaaaggccatgttcctcatctgcgcctcctccaacgagcccgagatgtacgagatc
cacacgtcttctaaagaagagcgcaacacctggatcaagcacatccgccaagccgtggac
agctgccctcacacagaggagaggctcgttactgaagaagatggagcgagacagcagcac
ttcaaagaaattcaagaacatctaactgtgaaggacgctcagatcaggcaggctctcacg
gaaaagctgcggctgtacgctgacctggtcgagtgcgcaggggttttggaggacacagga
actcgccgtcatcttctgcttcggggagatgtctcggagctcctgcagggggagcagttg
ctcaagggagctattacagaggtggagaacctgcagaacattctggtgtccagttcgaaa
ggtgttccccagactgaggagaatccgagtcccagctcactgccaaaaagagcggggacg
ttcgggggctacgacagcaccgtcagtgtactgcagaagaacggcagtgtgaagaaacac
tcgactggagcaggaaaatccagagacaggagtcatagagccagttcagaccctcagctt
aaagaaatgtgtgccagtcaaggagtcgaggctgataacatttcttcccccagctggaat
atgatctgctctagatttccaagcacagagttctctgaccgggttctcctgctttcccag
cagctctacagtctacaggccgttgtctctcaacaggacagcatgattgagctgcagcgg
gcatctctgttctcagtcgagcgccagcggggcacggacgtgctcctcgagcaggaaaaa
cagaggaacctggagaagcaccgcgaggagatggctcatttccagcgtgtccaggcgcag
cagcagcaagagcaggagcgctgggagcgcgagcgggcgaggcaggtgaaacagaacgag
gccgagcagctccggctgcaggagcgagaggacgcgtgcaggaagctggaggaaagacta
gcgcaggagagactagagctgcagagccagaggcagaaataccagcaggacttggagagg
ctgcgagaatccatacgggttgtggcgagggagcaagagaagctcgagcagcaaaggaag
atgaagaaacggaatacggcacccatcacggcaacaacctacggctctgacacagtgcag
ctccccatgtcctccagttttaacggcgacctcctgataaactccggaccggattccttc
ctccaaacgccctctcagctccgctccagcacctcgttgtctcccgctgattactctgag
agggcagaactgcccctcccgcgccgggagagtagcgccaccatgcccgccaaaaccgag
gtacccatccacctggtcagcaccactaaccagctgcacaagcagggtggagtccagcag
cagatccccaccaagctggcaatgctgaagagcaaggacaagagcagcaaaatcaaaggc
tcccaacgcacagagagctcagcttcagtagacatgaagcacatgctctctcagaaactg
tcgtctcgagaacctgagagttcttttaaagctcgccgctccaccagtccacaccagcag
ctttcgcttgcttcgcctccgattccagattcccccattggagataaatacacccccgag
cctgggaaggcacagagcctcctgaagtcctatcctctccctgacgacaaagacaaggag
gaagttgtcatgctttag
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integrated database retrieval system
