Silurus meridionalis (southern catfish): 124391203
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Entry
124391203 CDS
T08004
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124391203 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
smeo03051
]
124391203 (psmd1)
Proteasome [BR:
smeo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
124391203 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Zip
Cnd1
PA26
SMYLE_N
Tim54
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
124391203
NCBI-ProteinID:
XP_046713574
LinkDB
All DBs
Position
9:6939699..6974372
Genome browser
AA seq
965 aa
AA seq
DB search
MITSAAGIISLLDEDEPQLKEFALQKLNSIVNDFWAEISESVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFEESLNYALGAGDLFNVTDDSEYVETIIAKCIDHYTKLRVENAELPE
DEEKKTIDPRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVSGLLAY
SLKICMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPTQDKDGDAMET
DDKAGSSPAGKAADLKDEPKDQNSKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGAL
GLGLAALGTARQDVYELLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGYKEAINLLEPMTNDPVNYVRQGALIASALIMIQQSEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSIVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVETQEAEKDKKEEEKEKEKEKKKEQEPNFQMLENPARAMPAQ
LRVLTMPETCRYQPFKPLHTGGIIILKDTSEEEEELVEPVSAHGPKIEEEEQEPEPPEAF
EYIDE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatcagccgctggaatcatatccctcttggatgaggatgagccgcaacttaag
gagtttgcgctccagaagcttaactccatcgtcaatgacttctgggctgaaatctcggag
tctgtggataaaattgaggtcctgtatgaagatgagacgttccgtagtagagcttttgct
gctttggtggcctctaaagtgttttatcacctcggtgcttttgaggagtctctgaactat
gctctgggtgctggagatctcttcaacgtcactgatgactccgaatacgtggaaaccatt
attgcaaaatgtatcgatcattacacgaagctgcgcgtggagaatgccgagctgccagag
gacgaagagaaaaagacaattgatcctcgtctggagggcattgttaataaaatgttccag
cgatgcctggatgatcacaagtataagcaggccattgggatcgccctggagaccaggcgc
ttggatgtgtttgagaaaactattcttgaatcgaatgatgtcagcggtctgctggcctac
agcctgaagatctgcatgtctctgatgcaaaacaaaaagttccgtaatgaggttctcagg
gtgcttgttaaactctacatgaacctggagaagccagatttcatcaacgtctgccagtgt
ctgatattcctggacgaccctcaagctgtaagtgatatcctggagaagctggtgaaggag
gacaaccttttgatggcatatcaaatctgcttcgacttgtacgaaagtgcgagccagcag
tttctgtcctccgttatccagaacctacgcaccgtcggcacacctatccctgctgttccc
ggatctacaaacactggcactgtgccaacgcaggacaaagacggtgatgcaatggagact
gatgataaagctggcagttctcctgctggaaaagctgcagatttgaaggacgaaccaaaa
gaccagaactcaaaaatgatcaaaatcctgagcggtgaaatggccattgagcttcatctg
cagttcctcattcgaaacaacaacacagacttaatgatcctcaaaaacacaaaggatgcg
gtacggaattcggtatgccacacagcgacggtcatagcaaactccttcatgcacacagga
accacaagtgaccagtttctcagagaaaatctggagtggcttgcgagagctaccaactgg
gcaaagttcacagccacagccagtcttggtgttattcacaagggccacgaaaaggaagcg
ctgcagctgatggctacatacctgcccaaagacacgtcaccaggctccgcctaccaggaa
ggagggggcctttatgcacttggactgatccatgccaaccatggcggagacatcattgat
tacctcctcagtcagcttaagaatgctagcaatgatattgtgcgtcatggaggagctctg
ggtcttggcttagcggctcttggtacggcgagacaggatgtttatgagcttctcaaatca
aacctttaccaggatgatgcagtcacaggagaggctgcaggtctggctttaggtctggtc
atgctgggctctaaatcagcgcaggctattgaggacatggtgggatacgctcaggagacg
cagcatgagaaaattctgcgcggcctggcagtgggcattgccctcgtcatgtatggcagg
atggaggaggcagatgcgctaattgagagcctctgcagggacaaagacccgattctgcgt
cgctcgggaatgtacacagtcggcatggcttactgcggctcgggaaacaacaaggccatc
cgacgcctgctgcatgtcgcggtcagtgatgtgaacgatgacgttcgcagagcggccgtc
gagtccatcgggttcattatgttcaggactccagagcagtgccccagtgtggtatccctc
ctgtctgagagttacaacccacatgtccgctgtggagcagcaatggctctggggatctgc
tgcgctggcactggatacaaggaagcaataaacctgctggaacccatgaccaatgatcca
gtcaactatgtgagacagggagcactcatcgcctctgccctcatcatgatccagcagagt
gaagtgacctgtcccaaggttaatcagtttaggcagctgtattccaaagtgatcaacgat
aagcatgatgatgtcatggctaaatttggagccattttggctcagggcattctggatgca
ggtggccggaacgtgactatttctttgcagtctcggaccggacacacgcacatgccgtcc
atcgtgggtctgttggtgttcacccagttctggttctggtttccactgtctcatttcttg
tctctggcttttactcccaccgccatcattggcctcaataaggacctgaagatgccaaaa
gtgcagtaccggtccaactgtaaaccgtcgacctttgcttatcctccagccctggaagtc
cctaaagagaaagagaaggagaaggtttctactgctgttctgtccatcactgctaaagcc
aagaagaaggagaaagaaaaagagaagaaggagaaggaagaggagaagatggaagtggag
acgcaggaggctgaaaaagacaagaaagaagaggagaaggagaaagagaaggagaagaaa
aaagagcaggagcccaatttccagatgttggagaatccggcaagagcgatgccggcacag
ctccgagtgctaaccatgcctgagacctgtcgctatcagccatttaaaccactccacaca
ggtggtattatcatcctgaaggacaccagtgaggaggaggaggagcttgtggagccagtc
tccgcccacgggcctaaaatagaagaggaggagcaggagcctgagcccccagaggccttt
gagtatatagacgagtga
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