Silurus meridionalis (southern catfish): 124391311
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Entry
124391311 CDS
T08004
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124391311 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124391311 (exosc6)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124391311 (exosc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124391311
NCBI-ProteinID:
XP_046713767
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All DBs
Position
9:complement(17048648..17049664)
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AA seq
272 aa
AA seq
DB search
MPVDNKRVRGPEISQSPLLFLPPDSQISKVSSSSGRQGARGNGDIRPLFARCGLVSQAKG
SAYLEAGNTKIICSVYGPRETERKDETDMKSGRLVCDFRLAPFSCPKRGAWIQNAEERDL
STALAESLQPGACLHRYPRAQVDVNVVVLENDGSALAHAVTCASMALADAGIEMYDTVLG
CALRQDEERCLVDPDLAEERAESSAENQGRVVVALLPNLNQISGLQADGEMREDSLTAAV
RTCVEGCHRLYPVVQQAILRAVKKKAAPPPEK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggtagataataaacgtgtccgcggaccggagatatctcagtccccgttgttattt
cttcctccggactcacagatttccaaagtcagcagcagtagcgggagacagggcgcgcga
ggaaatggtgatatccggccgttgttcgcgcgctgcggtctcgtgagccaggccaagggc
tccgcgtacctcgaggccggcaacacgaagatcatctgctcggtgtacggcccgcgcgag
accgagcgcaaggatgaaaccgacatgaagagcggacgccttgtgtgcgacttccgcctg
gcgccgttttcctgcccgaagcgcggcgcgtggatccaaaacgccgaggagcgcgacttg
tccacggcgctggcggagagtctgcagcccggcgcgtgtctgcaccgctacccgcgcgcg
caggtcgacgtgaacgttgtggtgctggagaacgacggctcggctctggcgcacgcggtc
acgtgcgcgtccatggcgctcgcggacgccgggatcgagatgtacgacacggtgctgggc
tgcgcgctcaggcaggacgaagagcggtgcctcgtggacccggacctcgcggaggagcgc
gccgagagcagcgcggagaaccagggccgcgtcgtggtggcgcttctccccaacctcaac
cagatttccgggctgcaagcggacggcgagatgcgcgaggactcgttaacggccgccgtc
agaacgtgcgtcgagggctgtcacaggctgtacccggtggtgcaacaagccatactgcgg
gcagttaaaaagaaagcagcacctccacctgaaaaataa
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