Silurus meridionalis (southern catfish): 124391349
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Entry
124391349 CDS
T08004
Name
(RefSeq) keratin, type I cytoskeletal 50 kDa-like
KO
K07604
type I keratin, acidic
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124391349
04147 Exosome [BR:
smeo04147
]
124391349
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124391349
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124391349
Exosomal proteins of other body fluids (saliva and urine)
124391349
Exosomal proteins of colorectal cancer cells
124391349
Exosomal proteins of melanoma cells
124391349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Nuf2_DHR10-like
BAT
ATG16
ADIP
Sec3_C_2
DUF4693
DUF1664
Motif
Other DBs
NCBI-GeneID:
124391349
NCBI-ProteinID:
XP_046713822
LinkDB
All DBs
Position
9:complement(25738856..25741128)
Genome browser
AA seq
456 aa
AA seq
DB search
MSFSSSSGSFGGSSFRSPGSIRSSSGFAVSSGRAPSMYGGSGGRGVRISTVSSSMYGGGG
GGGFGGASGIGSAGLGFGSGFGFGGGGGGGGGGCVSSGYGFGGELAAGDPGSVTTSEKAT
MQNLNDRLASYLQKVRSLEKANGDLEIKIRQFLENKASPHARDYSAYEATIKDLQDKIQA
ATRDNGSLYLHIDNAKLAADDFRTKYENELAMRQSVEADIAGLRSLLDELTLTRSNLEMQ
IESLKDELIYLKKNHEEELEAIRNTMSGSVNVEVDAAPGEDLNRVMAEIREQYEAVALKN
KRELESWFQTKIDNLNKEVTTSTEILQTSKSEINDVRRTLQGLEIELQSQLSMKASMEGT
LADTENRYSMKLSGLQSQVTQMEHQLSEVRDSTERQSQEYKILLDIKTRLEMEIAEYRRL
MDGEVDSGKTSSSKSVMVKTIVEEMVDGKLVSSITT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcctcctcatccggatccttcggtggaagctcctttcggagccctggttct
attagatcctctagtggttttgcagtgtctagtggccgtgcccccagcatgtacggtggt
tctggtggacgtggtgtgcgcatctccaccgtttctagctccatgtatggtggtggtggt
ggtggtggttttggtggtgctagtggtattggttctgcagggctaggttttggtagtggc
tttggatttggaggtggtggaggtggaggtggaggtggttgtgtaagcagtgggtatgga
ttcggtggggaacttgctgctggagatccaggatctgtgacaaccagtgagaaggccacc
atgcagaacctgaatgaccgtctggcatcttacctgcaaaaggttcgcagcttggagaag
gccaatggtgacttggaaatcaagatcagacagtttttggaaaacaaagcctcccctcat
gccagagactactctgcttacgaggccaccataaaggatctgcaagataagatccaggcg
gctaccagagataatggaagcctctacctgcacattgataatgcgaaattggctgcagat
gacttcagaaccaagtatgagaatgagttggcgatgcgtcaatcggtggaggcagacatc
gctgggctcaggagccttctagatgagctgacattgacaaggtcaaacctggagatgcag
atcgaaagccttaaggatgagttgatttacctcaagaaaaaccatgaggaggaactggaa
gcaattcgtaacacaatgtcaggtagtgtgaacgtggaggtggacgctgcacctggtgaa
gatctgaaccgtgttatggctgagattcgtgagcagtatgaagctgtggctcttaagaac
aagcgtgaactagagagctggttccagaccaagattgataatctgaataaggaggtgacc
accagtacagaaattctacaaacatccaaatcagagatcaatgatgtcagacgcactttg
caaggcctggagattgagcttcaatcccaactcagcatgaaagcatctatggagggaact
cttgcagatacagagaaccgctactccatgaaactatccggattgcaatctcaggtaaca
caaatggagcaccagctgtctgaggtccgagatagtacagagaggcaatctcaggagtac
aaaattcttctggacattaaaacccggcttgagatggagatcgctgagtacaggaggctg
atggatggagaagttgacagtggcaaaacgagcagcagcaaatctgtgatggtgaagacc
atcgtggaagagatggttgatgggaaattggtgtcctctataacgacttaa
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